| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23186 | 1:27,269,220-27,271,527 | + | C1H1g25026 | CX1g000184 | LOC_Os01g53240 | Os01g0733500 | - | Detail |
| C2H1g16933 | 1:27,272,531-27,277,968 | - | C1H1g17481 | CX1g001304 | LOC_Os01g53250 | Os01g0733600 | - | Detail |
| C2H1g28398 | 1:27,285,980-27,289,362 | + | C1H1g18098 | CX1g001858 | LOC_Os01g53260 | Os01g0734000 | OsWRKY23 | Detail |
| C2H1g03923 | 1:27,293,250-27,293,800 | + | C1H1g05786 | CX1g006620 | LOC_Os01g53280 | Os01g0734100 | - | Detail |
| C2H1g19534 | 1:27,304,010-27,311,886 | + | C1H1g09802 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C2H1g09241 | 1:27,326,536-27,327,972 | + | C1H1g16727 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C2H1g27577 | 1:27,338,608-27,340,083 | + | C1H1g17596 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C2H1g28000 | 1:27,363,984-27,365,414 | - | C1H1g12410 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C2H1g20968 | 1:27,364,009-27,365,288 | + | - | - | - | Os01g0735450 | - | Detail |
| C2H1g21886 | 1:27,365,328-27,367,380 | + | - | - | - | - | - | Detail |
| C2H1g03039 | 1:27,370,524-27,371,948 | - | C1H1g11199 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C2H1g19693 | 1:27,379,721-27,381,136 | - | C1H1g10989 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C2H1g23129 | 1:27,381,416-27,384,963 | + | C1H1g04228 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C2H1g09664 | 1:27,386,344-27,387,096 | + | C1H1g11257 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C2H1g22559 | 1:27,401,377-27,403,368 | + | C1H1g18188 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C2H1g29848 | 1:27,411,208-27,418,789 | + | C1H1g17501 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C2H1g21171 | 1:27,420,379-27,421,816 | + | C1H1g26053 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C2H1g23141 | 1:27,421,843-27,422,460 | + | C1H1g26053 | CX1g007234 | - | Os01g0221600 | OsALMT4 | Detail |
| C2H1g28481 | 1:27,428,371-27,429,000 | + | C1H1g28789 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C2H1g06822 | 1:27,430,737-27,435,013 | - | C1H1g20246 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042465 | 6:22,001,083-22,004,635 | + | C1H6g01359 | C2H6g02719 | LOC_Os06g41880 | Os06g0624100 | - | Detail |
| CX6g041453 | 6:22,011,621-22,013,627 | + | C1H6g18313 | C2H6g16937 | LOC_Os06g41910 | Os06g0624700 | - | Detail |
| CX6g045135 | 6:22,028,768-22,033,062 | + | C1H6g11989 | C2H6g18819 | LOC_Os06g41930 | Os06g0624900 | - | Detail |
| CX6g041216 | 6:22,041,821-22,042,435 | + | C1H6g30859 | - | LOC_Os06g41940 | - | - | Detail |
| CX6g045536 | 6:22,052,027-22,053,964 | + | C1H6g11677 | C2H6g28797 | LOC_Os06g41980 | Os06g0625200 | - | Detail |
| CX6g045878 | 6:22,054,676-22,064,304 | - | C1H6g13871 | C2H6g01537 | LOC_Os06g41990 | Os06g0625400 | SPP | Detail |
| CX6g043302 | 6:22,077,752-22,082,068 | + | C1H6g05053 | C2H6g09068 | LOC_Os06g42020 | Os06g0625700 | OsCSLA9 | Detail |
| CX6g044353 | 6:22,077,949-22,079,314 | - | - | - | - | Os06g0625733 | - | Detail |
| CX6g042213 | 6:22,082,736-22,089,098 | - | C1H6g31374 | C2H6g22642 | LOC_Os06g42030 | Os06g0625800 | - | Detail |
| CX6g045268 | 6:22,111,308-22,111,718 | + | C1H6g23109 | C2H6g11680 | - | - | - | Detail |
| CX6g042284 | 6:22,115,349-22,116,407 | - | C1H6g10803 | C2H6g12983 | LOC_Os06g42120 | Os06g0626600 | - | Detail |
| CX6g043497 | 6:22,119,313-22,120,434 | - | C1H6g23364 | C2H6g23738 | LOC_Os06g42130 | Os06g0626700 | - | Detail |
| CX6g042675 | 6:22,139,913-22,140,200 | - | - | - | LOC_Os06g42140 | Os06g0626950 | - | Detail |
| CX6g045359 | 6:22,144,553-22,144,804 | - | C1H6g20570 | - | LOC_Os06g42140 | Os06g0626950 | - | Detail |
| CX6g042667 | 6:22,151,202-22,152,539 | - | C1H6g04857 | C2H6g13363 | LOC_Os06g42220 | Os06g0627500 | - | Detail |
| CX6g045016 | 6:22,158,853-22,160,577 | + | C1H6g09355 | C2H6g15686 | LOC_Os06g42280 | Os06g0628032 | - | Detail |
| CX6g041586 | 6:22,162,254-22,162,457 | - | - | - | - | Os09g0373750 | - | Detail |
| CX6g043658 | 6:22,169,949-22,177,369 | - | C1H6g08901 | C2H6g14286 | LOC_Os06g42310 | Os06g0628500 | - | Detail |
| CX6g045253 | 6:22,178,100-22,178,261 | - | - | - | - | - | - | Detail |
| CX6g042377 | 6:22,179,976-22,180,263 | + | C1H6g07519 | - | - | - | - | Detail |