| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19235 | 3:27,516,404-27,521,289 | - | C2H3g09804 | CX3g028000 | LOC_Os03g51250 | Os03g0722600 | - | Detail |
| C1H3g11775 | 3:27,524,762-27,526,918 | + | - | - | LOC_Os03g51260 | Os03g0722700 | - | Detail |
| C1H3g19716 | 3:27,530,964-27,538,047 | - | C2H3g01791 | CX3g028913 | LOC_Os03g51270 | Os03g0722800 | - | Detail |
| C1H3g18634 | 3:27,547,775-27,551,002 | + | C2H3g19711 | CX3g030375 | LOC_Os03g51330 | Os03g0723000 | - | Detail |
| C1H3g19621 | 3:27,554,129-27,555,117 | + | C2H3g23515 | CX3g025582 | LOC_Os03g51340 | - | - | Detail |
| C1H3g18910 | 3:27,560,158-27,561,187 | + | C2H3g08290 | CX3g030020 | LOC_Os03g51350 | Os03g0723400 | - | Detail |
| C1H3g18603 | 3:27,567,486-27,571,158 | + | C2H3g16773 | CX3g027992 | LOC_Os03g51380 | Os03g0723600 | - | Detail |
| C1H3g21377 | 3:27,584,910-27,585,263 | - | - | CX3g030004 | LOC_Os03g51420 | Os03g0724000 | - | Detail |
| C1H3g29238 | 3:27,595,306-27,596,865 | + | C2H3g11512 | CX3g025224 | LOC_Os03g51430 | Os03g0724100 | OsSec14-11 | Detail |
| C1H3g20683 | 3:27,598,455-27,602,134 | - | C2H3g26453 | CX3g028077 | LOC_Os03g51440 | Os03g0724300 | - | Detail |
| C1H3g30120 | 3:27,621,431-27,621,820 | - | C2H3g05139 | CX3g025441 | LOC_Os03g51459 | Os03g0724500 | - | Detail |
| C1H3g05968 | 3:27,624,582-27,626,556 | - | C2H3g13019 | CX3g025693 | LOC_Os03g51470 | Os03g0724600 | - | Detail |
| C1H3g04363 | 3:27,627,467-27,629,060 | + | C2H3g05753 | CX3g027196 | LOC_Os03g51479 | Os03g0724700 | - | Detail |
| C1H3g15090 | 3:27,671,660-27,671,971 | + | C2H3g12890 | CX3g028977 | LOC_Os03g51510 | Os03g0725000 | - | Detail |
| C1H3g02037 | 3:27,673,436-27,683,235 | + | C2H3g20716 | CX3g030919 | LOC_Os03g51520 | Os03g0725100 | - | Detail |
| C1H3g18345 | 3:27,684,895-27,690,679 | + | C2H3g06290 | CX3g029201 | LOC_Os03g51530 | Os03g0725200 | - | Detail |
| C1H3g09008 | 3:27,691,503-27,695,265 | + | C2H3g04142 | CX3g028312 | LOC_Os03g51550 | Os03g0725400 | - | Detail |
| C1H3g28685 | 3:27,722,430-27,724,857 | + | C2H3g06970 | CX3g029203 | LOC_Os03g51580 | Os03g0725800 | - | Detail |
| C1H3g18025 | 3:27,738,675-27,741,670 | + | C2H3g21598 | CX3g026793 | LOC_Os03g51600 | Os03g0726100 | - | Detail |
| C1H3g31013 | 3:27,748,093-27,753,800 | + | C2H3g10415 | CX3g027533 | LOC_Os03g51610 | Os03g0726200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042462 | 6:21,732,865-21,733,416 | - | - | - | - | - | - | Detail |
| CX6g043567 | 6:21,736,413-21,736,640 | - | - | - | - | - | - | Detail |
| CX6g042504 | 6:21,741,608-21,742,065 | + | C1H6g25707 | C2H6g23980 | LOC_Os06g41410 | Os06g0618300 | - | Detail |
| CX6g045303 | 6:21,745,729-21,752,430 | + | C1H6g13799 | C2H6g04902 | LOC_Os06g41440 | Os06g0618600 | - | Detail |
| CX6g045809 | 6:21,757,656-21,758,234 | - | C1H6g14930 | - | LOC_Os06g41450 | Os06g0618700 | - | Detail |
| CX6g045850 | 6:21,769,420-21,773,263 | + | C1H6g28177 | C2H6g07766 | LOC_Os06g41480 | Os06g0619000 | - | Detail |
| CX6g041577 | 6:21,776,720-21,781,634 | - | C1H6g29182 | C2H6g07877 | LOC_Os06g41500 | Os06g0619600 | SDRLK-63 | Detail |
| CX6g041460 | 6:21,795,869-21,797,410 | + | C1H6g20912 | C2H6g03801 | LOC_Os06g41510 | Os06g0619600 | SDRLK-63 | Detail |
| CX6g043423 | 6:21,807,508-21,807,693 | - | - | - | - | - | - | Detail |
| CX6g044686 | 6:21,808,191-21,808,622 | + | C1H6g03185 | - | LOC_Os06g41580 | - | - | Detail |
| CX6g041909 | 6:21,812,241-21,814,644 | - | C1H6g28069 | C2H6g11676 | LOC_Os06g41590 | Os06g0620600 | - | Detail |
| CX6g044383 | 6:21,815,472-21,815,726 | + | C1H6g13758 | - | LOC_Os06g41600 | Os06g0620700 | - | Detail |
| CX6g042042 | 6:21,818,895-21,822,549 | - | C1H6g26673 | C2H6g05158 | LOC_Os06g41670 | Os06g0621800 | - | Detail |
| CX6g041804 | 6:21,833,514-21,834,059 | + | - | C2H1g04783 | - | - | - | Detail |
| CX6g043159 | 6:21,837,971-21,841,606 | - | C1H6g26673 | C2H6g05158 | LOC_Os06g41670 | Os06g0621600 | - | Detail |
| CX6g044505 | 6:21,849,720-21,853,121 | + | C1H6g16161 | C2H6g25692 | LOC_Os06g41700 | Os06g0621900 | - | Detail |
| CX6g044504 | 6:21,854,132-21,864,751 | - | C1H6g11844 | C2H6g05882 | LOC_Os06g41710 | Os06g0622000 | - | Detail |
| CX6g043097 | 6:21,868,726-21,873,482 | + | C1H6g02476 | C2H6g00136 | LOC_Os06g41730 | Os06g0622300 | - | Detail |
| CX6g045430 | 6:21,879,581-21,889,036 | - | C1H6g16341 | C2H6g04186 | LOC_Os06g41750 | Os06g0622500 | - | Detail |
| CX6g045169 | 6:21,893,673-21,895,511 | + | C1H6g30174 | C2H6g08413 | LOC_Os06g41770 | Os06g0622700 | BZIP50, OsbZIP60, bZIP50, OsbZIP50, OsbZIP74, OsbZIP50-S | Detail |