| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27418 | 1:17,413,631-17,420,934 | + | C2H1g21312 | CX1g005208 | LOC_Os08g09860 | - | - | Detail |
| C1H1g28314 | 1:17,443,733-17,444,303 | + | C2H1g17187 | CX1g003392 | LOC_Os01g33670 | Os01g0520500 | - | Detail |
| C1H1g02683 | 1:17,445,295-17,450,504 | - | C2H1g08242 | CX1g006219 | LOC_Os01g33684 | Os01g0520600 | - | Detail |
| C1H1g27816 | 1:17,476,223-17,477,466 | + | - | CX1g001522 | LOC_Os01g33762 | Os04g0228300 | - | Detail |
| C1H1g04217 | 1:17,498,928-17,506,747 | + | C2H1g00800 | CX1g002325 | LOC_Os01g33784 | Os01g0521400 | - | Detail |
| C1H1g30357 | 1:17,510,328-17,520,815 | + | C2H1g26145 | CX1g001131 | LOC_Os01g33800 | Os01g0521500 | - | Detail |
| C1H1g25202 | 1:17,537,078-17,538,135 | + | C2H1g21205 | CX1g005107 | LOC_Os01g33910 | Os01g0522100 | - | Detail |
| C1H1g08450 | 1:17,556,024-17,559,721 | + | C2H1g18568 | CX1g005107 | LOC_Os01g33930 | Os01g0522950 | - | Detail |
| C1H1g10941 | 1:17,562,380-17,563,337 | + | C2H1g11782 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C1H1g21896 | 1:17,564,801-17,565,783 | + | C2H1g11782 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C1H1g09014 | 1:17,573,170-17,581,097 | + | C2H1g13197 | CX1g005107 | LOC_Os01g34000 | Os01g0524100 | ESA1 | Detail |
| C1H1g03031 | 1:17,609,485-17,611,145 | + | C2H1g22021 | CX1g000293 | LOC_Os01g34060 | Os01g0863300 | - | Detail |
| C1H1g05337 | 1:17,624,574-17,635,162 | + | C2H1g01344 | CX1g003083 | LOC_Os01g34080 | Os01g0524700 | - | Detail |
| C1H1g08661 | 1:17,704,268-17,705,104 | + | C2H1g28979 | - | - | - | - | Detail |
| C1H1g01010 | 1:17,706,879-17,709,624 | + | C2H1g17057 | CX1g002923 | LOC_Os01g34190 | Os01g0526100 | - | Detail |
| C1H1g10979 | 1:17,710,839-17,714,130 | + | C2H1g19688 | CX1g003716 | LOC_Os01g34200 | Os01g0526200 | - | Detail |
| C1H1g28687 | 1:17,745,595-17,761,416 | + | C2H1g06550 | CX1g006793 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| C1H1g03628 | 1:17,762,560-17,767,791 | - | C2H1g06422 | CX1g000241 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| C1H1g18093 | 1:17,772,289-17,777,173 | - | C2H1g29503 | CX1g004192 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| C1H1g30321 | 1:17,779,715-17,791,385 | + | C2H1g02847 | CX1g007113 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041284 | 6:21,129,809-21,137,509 | - | C1H6g06738 | C2H6g21336 | LOC_Os06g40590 | Os06g0608100 | - | Detail |
| CX6g044547 | 6:21,138,891-21,144,135 | - | C1H6g22076 | C2H6g24273 | LOC_Os06g40600 | Os06g0608300 | - | Detail |
| CX6g044120 | 6:21,147,459-21,151,673 | + | C1H6g01423 | C2H6g17388 | LOC_Os06g40620 | Os06g0608500 | OsSNF7 | Detail |
| CX6g041248 | 6:21,152,755-21,155,768 | + | C1H6g30921 | C2H6g02272 | LOC_Os06g40630 | Os06g0608600 | - | Detail |
| CX6g042521 | 6:21,157,219-21,158,367 | + | C1H6g15681 | C2H6g07039 | LOC_Os06g40640 | Os06g0608700 | OsAld-Y, YGDL-1, YGDL1 | Detail |
| CX6g042318 | 6:21,159,095-21,163,081 | - | C1H6g06287 | C2H6g15713 | LOC_Os06g40650 | Os06g0608800 | - | Detail |
| CX6g043436 | 6:21,169,040-21,169,534 | - | - | - | - | - | - | Detail |
| CX6g045736 | 6:21,175,061-21,179,879 | + | C1H6g19126 | C2H6g28606 | LOC_Os06g40700 | Os06g0609400 | - | Detail |
| CX6g045493 | 6:21,178,777-21,179,049 | - | - | - | - | - | - | Detail |
| CX6g045105 | 6:21,181,662-21,183,790 | + | C1H6g19676 | C2H6g16115 | LOC_Os06g40704 | Os06g0609450 | - | Detail |
| CX6g043749 | 6:21,186,130-21,189,013 | + | C1H6g12368 | C2H6g21391 | LOC_Os06g40710 | Os06g0609500 | OsPHL7 | Detail |
| CX6g042186 | 6:21,189,573-21,191,099 | - | C1H6g04751 | C2H6g29481 | LOC_Os06g40720 | Os06g0609600 | - | Detail |
| CX6g045467 | 6:21,193,330-21,197,481 | - | C1H6g30193 | C2H6g01530 | LOC_Os06g40730 | Os06g0609700 | - | Detail |
| CX6g042694 | 6:21,197,453-21,197,938 | + | - | - | - | Os06g0609775 | - | Detail |
| CX6g044431 | 6:21,201,601-21,201,867 | - | C1H6g00899 | - | - | - | - | Detail |
| CX6g044752 | 6:21,203,704-21,208,180 | + | C1H6g07576 | C2H6g10244 | LOC_Os06g40740 | Os06g0609800 | - | Detail |
| CX6g045075 | 6:21,209,951-21,211,958 | + | - | C2H6g10481 | LOC_Os06g40750 | Os06g0609900 | - | Detail |
| CX6g041256 | 6:21,213,022-21,213,363 | + | C1H6g25384 | C2H6g14064 | LOC_Os06g40760 | Os06g0610000 | - | Detail |
| CX6g042793 | 6:21,226,773-21,227,117 | + | C1H6g25384 | C2H6g14064 | LOC_Os06g40760 | Os06g0610000 | - | Detail |
| CX6g044746 | 6:21,252,217-21,253,167 | - | C1H6g22505 | C2H6g27774 | LOC_Os06g40770 | Os06g0610100 | - | Detail |