| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09586 | 4:26,893,759-26,894,720 | + | C2H4g15134 | CX4g031847 | LOC_Os04g52110 | Os04g0610600 | - | Detail |
| C1H4g14376 | 4:26,895,285-26,899,907 | - | C2H4g09334 | CX4g033504 | LOC_Os04g52120 | Os04g0610700 | - | Detail |
| C1H4g14177 | 4:26,902,135-26,905,880 | + | C2H4g09691 | CX4g033376 | LOC_Os04g52130 | Os04g0610800 | RLIN1, LLM1 | Detail |
| C1H4g09163 | 4:26,914,001-26,919,215 | + | C2H4g11372 | CX4g036098 | LOC_Os04g52140 | Os04g0610900 | - | Detail |
| C1H4g23425 | 4:26,920,411-26,920,769 | - | C2H4g01714 | - | - | - | - | Detail |
| C1H4g04249 | 4:26,929,103-26,932,737 | + | C2H4g26244 | CX4g036457 | LOC_Os04g52164 | Os04g0611200 | OsCER2, CER2 | Detail |
| C1H4g10872 | 4:26,933,463-26,935,705 | + | C2H4g08391 | CX4g036475 | LOC_Os04g52180 | Os04g0611300 | - | Detail |
| C1H4g27242 | 4:26,936,755-26,940,405 | + | C2H4g02094 | CX4g034440 | LOC_Os04g52190 | Os04g0611400 | OsVSR7 | Detail |
| C1H4g09397 | 4:26,940,306-26,946,696 | - | C2H4g06949 | CX4g034242 | LOC_Os04g52200 | Os04g0611500 | - | Detail |
| C1H4g04516 | 4:26,954,495-26,961,853 | + | C2H4g15117 | CX4g033691 | LOC_Os04g52210 | Os04g0611700 | OsTPS39, OsKSL4 | Detail |
| C1H4g02714 | 4:26,963,534-26,966,409 | - | - | - | - | - | - | Detail |
| C1H4g09771 | 4:26,967,143-26,972,095 | + | C2H4g00671 | CX4g033691 | LOC_Os04g52230 | Os04g0611800 | OsKSL2 | Detail |
| C1H4g22925 | 4:26,976,309-26,982,128 | + | C2H4g15117 | CX4g032176 | LOC_Os04g52240 | Os04g0612000 | KS2, OsKS2, KS2, KSL2, OsKSL2, OsTPS27, OsKSL5 | Detail |
| C1H4g18596 | 4:26,982,575-26,984,834 | - | C2H4g26250 | CX4g035138 | - | Os04g0612100 | - | Detail |
| C1H4g09223 | 4:26,989,071-26,989,550 | - | - | - | - | Os04g0644433 | - | Detail |
| C1H4g23379 | 4:27,000,541-27,005,877 | - | C2H4g26765 | CX4g032492 | LOC_Os04g52270 | Os04g0612600 | - | Detail |
| C1H4g22616 | 4:27,008,639-27,013,797 | + | C2H4g08408 | CX4g036512 | LOC_Os04g52280 | Os04g0612700 | FC1, OsCAD7 | Detail |
| C1H4g13487 | 4:27,013,914-27,016,262 | - | C2H4g11392 | CX4g033473 | LOC_Os04g52290 | Os04g0612800 | - | Detail |
| C1H4g23018 | 4:27,017,080-27,017,602 | + | C2H4g06866 | CX4g035500 | LOC_Os04g52300 | Os04g0612900 | - | Detail |
| C1H4g19703 | 4:27,018,164-27,020,375 | - | C2H4g30388 | CX4g036361 | LOC_Os04g52310 | Os04g0613000 | ZIP3, OsZIP3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002944 | 1:25,444,405-25,446,856 | + | C1H1g27228 | C2H1g18077 | LOC_Os01g49320 | Os01g0691050 | - | Detail |
| CX1g001683 | 1:25,447,512-25,448,648 | - | C1H1g29046 | C2H1g22688 | LOC_Os01g49640 | Os01g0691300 | - | Detail |
| CX1g006685 | 1:25,449,250-25,450,596 | + | C1H1g12678 | C2H1g26124 | LOC_Os01g49660 | Os01g0691400 | - | Detail |
| CX1g003503 | 1:25,451,355-25,454,745 | - | C1H1g11648 | C2H1g16571 | LOC_Os01g49670 | Os01g0691500 | - | Detail |
| CX1g003138 | 1:25,454,891-25,462,340 | + | C1H1g24416 | C2H1g18353 | LOC_Os01g49680 | Os01g0691600 | - | Detail |
| CX1g001134 | 1:25,464,773-25,468,766 | + | C1H1g26359 | C2H1g17191 | LOC_Os01g49690 | Os01g0691700 | - | Detail |
| CX1g003734 | 1:25,472,403-25,472,894 | - | - | - | - | - | - | Detail |
| CX1g001038 | 1:25,476,417-25,480,854 | - | C1H1g16215 | C2H1g11955 | LOC_Os01g49720 | Os01g0692000 | - | Detail |
| CX1g002278 | 1:25,483,521-25,485,766 | + | C1H1g08026 | C2H1g16812 | LOC_Os01g49740 | Os01g0692300 | - | Detail |
| CX1g004143 | 1:25,492,714-25,496,982 | + | C1H1g09942 | C2H1g01533 | LOC_Os01g49760 | Os01g0692600 | - | Detail |
| CX1g006365 | 1:25,498,061-25,501,573 | - | C1H1g28839 | C2H1g21603 | LOC_Os01g49770 | Os01g0692700 | OsSIRH2-23, OsRFPH2-23 | Detail |
| CX1g003738 | 1:25,512,163-25,513,122 | + | C1H1g28446 | C2H1g03137 | LOC_Os01g49810 | Os01g0693100 | - | Detail |
| CX1g001085 | 1:25,518,791-25,520,638 | + | C1H1g29386 | C2H1g09620 | LOC_Os01g49820 | Os01g0693300 | - | Detail |
| CX1g003260 | 1:25,531,981-25,533,168 | - | C1H1g22206 | C2H1g04896 | LOC_Os01g49830 | Os01g0693400 | OsRAV11 | Detail |
| CX1g002454 | 1:25,536,309-25,536,698 | + | - | - | - | Os01g0693466 | - | Detail |
| CX1g004016 | 1:25,555,625-25,555,774 | - | - | - | - | - | - | Detail |
| CX1g004359 | 1:25,561,492-25,561,674 | + | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g001144 | 1:25,573,165-25,574,757 | - | C1H5g02487 | C2H5g22501 | LOC_Os01g49890 | Os01g0693800 | - | Detail |
| CX1g006741 | 1:25,577,232-25,579,455 | - | C1H1g28615 | C2H1g14365 | LOC_Os01g49900 | Os01g0693900 | - | Detail |
| CX1g002422 | 1:25,584,759-25,588,055 | + | C1H1g20356 | C2H1g09264 | LOC_Os01g49910 | Os01g0694000 | - | Detail |