| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24580 | 4:22,669,391-22,677,012 | + | C1H4g31583 | CX4g031624 | LOC_Os04g44320 | Os04g0524600 | - | Detail |
| C2H4g13558 | 4:22,680,569-22,683,531 | + | C1H4g03289 | CX4g035938 | LOC_Os04g44330 | Os04g0524900 | - | Detail |
| C2H4g06209 | 4:22,684,214-22,684,580 | - | C1H4g04192 | CX4g032796 | - | Os04g0524950 | - | Detail |
| C2H4g24635 | 4:22,685,091-22,686,520 | - | C1H4g13077 | CX4g036453 | LOC_Os04g44340 | Os04g0525000 | - | Detail |
| C2H4g03449 | 4:22,687,243-22,694,544 | - | C1H4g11662 | CX4g034629 | LOC_Os04g44354 | Os04g0525100 | - | Detail |
| C2H4g03013 | 4:22,700,092-22,701,024 | + | C1H2g16676 | CX4g032465 | LOC_Os04g44400 | Os04g0525600 | - | Detail |
| C2H4g02519 | 4:22,702,824-22,707,773 | - | C1H4g29555 | CX4g035890 | LOC_Os04g44410 | Os04g0525700 | - | Detail |
| C2H4g12988 | 4:22,711,442-22,712,059 | - | - | CX4g035880 | LOC_Os04g44420 | Os04g0525800 | - | Detail |
| C2H4g01154 | 4:22,714,923-22,723,145 | + | C1H4g21652 | CX4g035136 | LOC_Os04g44430 | Os04g0525900 | - | Detail |
| C2H4g17202 | 4:22,727,236-22,727,862 | + | C1H4g29840 | CX4g032724 | LOC_Os04g44440 | Os04g0526000 | - | Detail |
| C2H4g30395 | 4:22,730,475-22,734,614 | + | C1H4g10699 | CX4g035210 | - | Os04g0526200 | - | Detail |
| C2H4g12237 | 4:22,736,876-22,737,916 | + | - | CX4g034515 | LOC_Os04g44460 | Os04g0526300 | - | Detail |
| C2H4g00760 | 4:22,739,901-22,740,503 | - | - | CX4g035429 | LOC_Os04g44470 | Os04g0526600 | RASI | Detail |
| C2H4g08104 | 4:22,744,173-22,745,103 | - | C1H4g09431 | CX4g035727 | LOC_Os04g44500 | Os04g0526800 | OsABAR1 | Detail |
| C2H4g16336 | 4:22,748,766-22,749,531 | - | C1H4g14455 | CX4g036391 | LOC_Os04g44510 | Os04g0527000 | - | Detail |
| C2H4g06765 | 4:22,769,318-22,772,491 | + | C1H4g22693 | CX4g036100 | LOC_Os04g44530 | Os04g0527400 | - | Detail |
| C2H4g18510 | 4:22,773,344-22,776,485 | - | C1H4g12252 | CX4g032917 | LOC_Os04g44540 | Os04g0527500 | - | Detail |
| C2H4g27789 | 4:22,776,879-22,779,566 | + | C1H4g00480 | - | LOC_Os04g44550 | Os04g0527700 | - | Detail |
| C2H4g10871 | 4:22,780,644-22,784,795 | + | C1H4g03098 | CX4g035475 | LOC_Os04g44560 | Os04g0527800 | - | Detail |
| C2H4g08265 | 4:22,785,341-22,786,751 | + | C1H4g02779 | CX4g033692 | LOC_Os04g44570 | Os04g0527900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041818 | 6:20,782,368-20,784,715 | - | C1H6g22569 | C2H6g05068 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| CX6g044402 | 6:20,792,682-20,793,095 | + | - | - | - | - | - | Detail |
| CX6g042177 | 6:20,800,909-20,804,360 | + | C1H6g14736 | C2H6g14435 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| CX6g041181 | 6:20,806,200-20,809,471 | - | C1H6g19546 | C2H6g04094 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| CX6g043114 | 6:20,811,997-20,815,509 | - | C1H6g00043 | C2H6g04563 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| CX6g043884 | 6:20,821,706-20,822,176 | - | C1H6g15267 | - | LOC_Os06g40090 | Os06g0603300 | - | Detail |
| CX6g044727 | 6:20,832,407-20,833,189 | - | C1H6g03115 | - | LOC_Os06g40110 | Os06g0603400 | - | Detail |
| CX6g043946 | 6:20,834,310-20,838,350 | - | C1H6g11187 | C2H6g18680 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| CX6g044688 | 6:20,854,913-20,855,884 | - | C1H6g05477 | C2H6g21981 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| CX6g045934 | 6:20,864,295-20,867,107 | - | C1H6g20423 | C2H6g11228 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| CX6g045594 | 6:20,877,760-20,880,469 | + | C1H6g10180 | C2H6g26456 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| CX6g041305 | 6:20,884,845-20,887,842 | + | C1H6g27795 | C2H6g06437 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| CX6g042132 | 6:20,891,329-20,895,466 | + | C1H6g25357 | C2H6g13702 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| CX6g044895 | 6:20,906,491-20,907,205 | + | C1H6g04884 | C2H6g02651 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| CX6g044580 | 6:20,909,831-20,910,010 | + | - | - | - | - | - | Detail |
| CX6g045437 | 6:20,914,817-20,916,161 | - | C1H6g20614 | C2H6g13160 | LOC_Os06g40220 | - | - | Detail |
| CX6g045873 | 6:20,926,789-20,927,285 | + | C1H6g13328 | C2H6g05081 | LOC_Os06g40320 | - | - | Detail |
| CX6g045154 | 6:20,948,972-20,954,044 | - | C1H6g27028 | C2H6g19267 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g045451 | 6:20,969,605-20,974,700 | - | C1H6g27028 | C2H6g16209 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g041629 | 6:20,978,535-20,978,891 | + | - | - | - | - | - | Detail |