| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g02738 | 2:495,777-496,085 | + | C1H2g05661 | - | LOC_Os02g02010 | - | - | Detail |
| C2H2g06704 | 2:497,507-497,872 | + | C1H2g01430 | - | LOC_Os02g02010 | Os02g0110300 | - | Detail |
| C2H2g01592 | 2:499,909-502,149 | - | C1H2g30076 | CX2g022683 | LOC_Os02g02020 | Os02g0110400 | OsCPPR1 | Detail |
| C2H2g29276 | 2:503,897-504,900 | - | C1H2g05839 | - | LOC_Os02g02030 | Os02g0110500 | - | Detail |
| C2H2g23344 | 2:505,071-511,150 | - | C1H2g22020 | CX2g020339 | LOC_Os02g02040 | Os02g0110600 | - | Detail |
| C2H2g09423 | 2:511,212-511,736 | + | C1H2g25885 | CX2g023145 | - | Os02g0144300 | - | Detail |
| C2H2g11436 | 2:512,219-528,456 | - | C1H2g28737 | CX2g020170 | LOC_Os02g02050 | Os02g0110700 | - | Detail |
| C2H2g03291 | 2:534,022-539,607 | + | C1H2g23635 | - | - | - | - | Detail |
| C2H2g28219 | 2:542,529-550,508 | + | C1H2g03642 | CX2g024805 | LOC_Os02g02110 | - | - | Detail |
| C2H2g25923 | 2:547,047-550,223 | - | C1H2g03397 | CX2g023278 | LOC_Os02g02120 | Os02g0111600 | OsWAK11 | Detail |
| C2H2g28301 | 2:551,548-553,536 | + | C1H2g01690 | CX2g022213 | LOC_Os02g02130 | Os02g0111700 | - | Detail |
| C2H2g15382 | 2:570,769-571,595 | - | C1H2g30533 | CX2g024174 | LOC_Os02g02160 | Os02g0112000 | - | Detail |
| C2H2g17743 | 2:591,979-603,893 | - | C1H2g07735 | CX2g019924 | LOC_Os02g02210 | Os02g0112900 | OsGABA-T | Detail |
| C2H2g20495 | 2:619,875-623,170 | + | C1H2g27463 | CX2g023815 | LOC_Os02g02230 | Os02g0113200 | - | Detail |
| C2H2g03042 | 2:625,195-626,864 | + | C1H2g00775 | CX2g022139 | LOC_Os02g02270 | Os02g0113800 | - | Detail |
| C2H2g10635 | 2:627,487-628,048 | + | C1H2g15227 | - | - | - | - | Detail |
| C2H2g25057 | 2:628,835-639,667 | - | C1H2g19532 | CX2g019365 | LOC_Os02g02290 | Os02g0114000 | OsBRM | Detail |
| C2H2g11144 | 2:643,748-645,076 | - | C1H2g15650 | CX2g020949 | LOC_Os02g02310 | Os02g0114100 | - | Detail |
| C2H2g30135 | 2:645,154-645,375 | - | C1H2g07896 | CX2g020949 | LOC_Os02g02310 | Os02g0114100 | - | Detail |
| C2H2g25462 | 2:648,161-652,853 | - | C1H2g30436 | CX2g024695 | LOC_Os02g02320 | Os02g0114200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041818 | 6:20,782,368-20,784,715 | - | C1H6g22569 | C2H6g05068 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| CX6g044402 | 6:20,792,682-20,793,095 | + | - | - | - | - | - | Detail |
| CX6g042177 | 6:20,800,909-20,804,360 | + | C1H6g14736 | C2H6g14435 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| CX6g041181 | 6:20,806,200-20,809,471 | - | C1H6g19546 | C2H6g04094 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| CX6g043114 | 6:20,811,997-20,815,509 | - | C1H6g00043 | C2H6g04563 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| CX6g043884 | 6:20,821,706-20,822,176 | - | C1H6g15267 | - | LOC_Os06g40090 | Os06g0603300 | - | Detail |
| CX6g044727 | 6:20,832,407-20,833,189 | - | C1H6g03115 | - | LOC_Os06g40110 | Os06g0603400 | - | Detail |
| CX6g043946 | 6:20,834,310-20,838,350 | - | C1H6g11187 | C2H6g18680 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| CX6g044688 | 6:20,854,913-20,855,884 | - | C1H6g05477 | C2H6g21981 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| CX6g045934 | 6:20,864,295-20,867,107 | - | C1H6g20423 | C2H6g11228 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| CX6g045594 | 6:20,877,760-20,880,469 | + | C1H6g10180 | C2H6g26456 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| CX6g041305 | 6:20,884,845-20,887,842 | + | C1H6g27795 | C2H6g06437 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| CX6g042132 | 6:20,891,329-20,895,466 | + | C1H6g25357 | C2H6g13702 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| CX6g044895 | 6:20,906,491-20,907,205 | + | C1H6g04884 | C2H6g02651 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| CX6g044580 | 6:20,909,831-20,910,010 | + | - | - | - | - | - | Detail |
| CX6g045437 | 6:20,914,817-20,916,161 | - | C1H6g20614 | C2H6g13160 | LOC_Os06g40220 | - | - | Detail |
| CX6g045873 | 6:20,926,789-20,927,285 | + | C1H6g13328 | C2H6g05081 | LOC_Os06g40320 | - | - | Detail |
| CX6g045154 | 6:20,948,972-20,954,044 | - | C1H6g27028 | C2H6g19267 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g045451 | 6:20,969,605-20,974,700 | - | C1H6g27028 | C2H6g16209 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g041629 | 6:20,978,535-20,978,891 | + | - | - | - | - | - | Detail |