| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g27498 | 12:22,409,007-22,413,636 | + | C1H12g28325 | CX12g015287 | LOC_Os12g42700 | Os12g0621700 | - | Detail |
| C2H12g08912 | 12:22,415,234-22,417,166 | - | C1H12g30723 | CX12g017039 | LOC_Os12g42730 | Os12g0621900 | - | Detail |
| C2H12g22804 | 12:22,417,725-22,419,829 | - | C1H12g27957 | CX12g017039 | LOC_Os12g42730 | Os12g0621900 | - | Detail |
| C2H12g07604 | 12:22,431,378-22,434,836 | + | C1H12g15885 | CX12g018456 | LOC_Os12g42830 | - | - | Detail |
| C2H12g21249 | 12:22,435,804-22,436,560 | + | C1H12g14602 | CX12g018679 | LOC_Os12g42840 | Os12g0623400 | - | Detail |
| C2H12g21042 | 12:22,437,144-22,438,354 | + | C1H12g14602 | CX12g017356 | LOC_Os12g42840 | - | - | Detail |
| C2H12g22736 | 12:22,438,731-22,443,673 | - | C1H12g12294 | CX12g017315 | LOC_Os12g42850 | Os12g0623500 | - | Detail |
| C2H12g23274 | 12:22,448,626-22,450,624 | - | C1H12g03492 | CX12g015341 | LOC_Os12g42860 | Os12g0623600 | - | Detail |
| C2H12g16080 | 12:22,454,333-22,459,425 | - | C1H12g31543 | CX12g016483 | LOC_Os12g42870 | Os12g0623800 | - | Detail |
| C2H12g20949 | 12:22,464,421-22,483,552 | + | C1H12g23276 | CX12g017926 | LOC_Os12g42884 | Os12g0624000 | - | Detail |
| C2H12g06055 | 12:22,484,624-22,485,949 | - | C1H12g05417 | CX12g015380 | LOC_Os12g42900 | Os12g0624100 | - | Detail |
| C2H12g19132 | 12:22,489,638-22,491,401 | + | C1H12g31433 | CX12g016604 | LOC_Os12g42910 | Os12g0624200 | - | Detail |
| C2H12g28674 | 12:22,493,254-22,494,369 | + | C1H12g30833 | CX12g017082 | LOC_Os12g42950 | Os12g0624700 | - | Detail |
| C2H12g20013 | 12:22,495,192-22,498,272 | - | C1H12g01558 | CX12g016203 | LOC_Os12g42960 | Os12g0624800 | - | Detail |
| C2H12g24744 | 12:22,503,121-22,505,598 | + | C1H12g26675 | CX12g016612 | LOC_Os12g42970 | Os12g0624900 | - | Detail |
| C2H12g16954 | 12:22,507,732-22,512,454 | - | C1H12g26300 | CX12g017828 | LOC_Os12g42980 | Os12g0625000 | OsOASTL-A2 | Detail |
| C2H12g02142 | 12:22,518,914-22,519,588 | - | C1H12g17680 | CX12g016056 | LOC_Os12g43140 | Os12g0626500 | - | Detail |
| C2H12g29464 | 12:22,531,072-22,533,887 | + | C1H12g13478 | CX12g015217 | LOC_Os12g43130 | Os12g0626400 | OsPSY2 | Detail |
| C2H12g10388 | 12:22,535,711-22,548,845 | + | C1H12g12539 | CX12g016973 | LOC_Os12g43120 | Os12g0626300 | - | Detail |
| C2H12g07513 | 12:22,551,168-22,551,551 | - | C1H12g21734 | CX12g018336 | LOC_Os12g43110 | Os12g0626200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041818 | 6:20,782,368-20,784,715 | - | C1H6g22569 | C2H6g05068 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| CX6g044402 | 6:20,792,682-20,793,095 | + | - | - | - | - | - | Detail |
| CX6g042177 | 6:20,800,909-20,804,360 | + | C1H6g14736 | C2H6g14435 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| CX6g041181 | 6:20,806,200-20,809,471 | - | C1H6g19546 | C2H6g04094 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| CX6g043114 | 6:20,811,997-20,815,509 | - | C1H6g00043 | C2H6g04563 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| CX6g043884 | 6:20,821,706-20,822,176 | - | C1H6g15267 | - | LOC_Os06g40090 | Os06g0603300 | - | Detail |
| CX6g044727 | 6:20,832,407-20,833,189 | - | C1H6g03115 | - | LOC_Os06g40110 | Os06g0603400 | - | Detail |
| CX6g043946 | 6:20,834,310-20,838,350 | - | C1H6g11187 | C2H6g18680 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| CX6g044688 | 6:20,854,913-20,855,884 | - | C1H6g05477 | C2H6g21981 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| CX6g045934 | 6:20,864,295-20,867,107 | - | C1H6g20423 | C2H6g11228 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| CX6g045594 | 6:20,877,760-20,880,469 | + | C1H6g10180 | C2H6g26456 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| CX6g041305 | 6:20,884,845-20,887,842 | + | C1H6g27795 | C2H6g06437 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| CX6g042132 | 6:20,891,329-20,895,466 | + | C1H6g25357 | C2H6g13702 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| CX6g044895 | 6:20,906,491-20,907,205 | + | C1H6g04884 | C2H6g02651 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| CX6g044580 | 6:20,909,831-20,910,010 | + | - | - | - | - | - | Detail |
| CX6g045437 | 6:20,914,817-20,916,161 | - | C1H6g20614 | C2H6g13160 | LOC_Os06g40220 | - | - | Detail |
| CX6g045873 | 6:20,926,789-20,927,285 | + | C1H6g13328 | C2H6g05081 | LOC_Os06g40320 | - | - | Detail |
| CX6g045154 | 6:20,948,972-20,954,044 | - | C1H6g27028 | C2H6g19267 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g045451 | 6:20,969,605-20,974,700 | - | C1H6g27028 | C2H6g16209 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g041629 | 6:20,978,535-20,978,891 | + | - | - | - | - | - | Detail |