| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g18996 | 7:19,090,061-19,090,273 | + | C1H7g27009 | - | - | - | - | Detail |
| C2H7g11317 | 7:19,091,657-19,100,908 | - | C1H7g25414 | CX7g048104 | LOC_Os07g38760 | Os07g0575100 | - | Detail |
| C2H7g07954 | 7:19,104,995-19,107,648 | - | C1H7g24947 | CX7g047702 | LOC_Os07g38790 | Os07g0575500 | - | Detail |
| C2H7g14555 | 7:19,114,327-19,117,058 | + | C1H7g23024 | CX7g049929 | LOC_Os07g38810 | Os07g0575600 | - | Detail |
| C2H7g15597 | 7:19,121,994-19,124,000 | - | C1H7g23059 | CX7g049340 | LOC_Os07g38810 | Os07g0575700 | BDR1, OsBDR1 | Detail |
| C2H7g09343 | 7:19,128,724-19,130,814 | - | C1H7g12575 | CX7g048725 | LOC_Os07g38820 | Os07g0575750 | - | Detail |
| C2H7g09520 | 7:19,132,330-19,135,922 | + | C1H7g26772 | CX7g046979 | LOC_Os07g38830 | Os07g0575800 | - | Detail |
| C2H7g23779 | 7:19,137,593-19,141,115 | + | C1H7g12949 | CX7g049127 | LOC_Os07g38840 | Os07g0575900 | - | Detail |
| C2H7g06473 | 7:19,141,210-19,148,689 | + | C1H7g13318 | CX7g046582 | LOC_Os07g38850 | Os07g0576000 | - | Detail |
| C2H7g22244 | 7:19,159,280-19,163,962 | + | C1H7g19169 | CX7g048069 | LOC_Os07g38930 | Os07g0577300 | - | Detail |
| C2H7g20880 | 7:19,164,679-19,167,423 | + | C1H7g08892 | CX7g048316 | LOC_Os07g38940 | Os07g0577400 | OsCOP10 | Detail |
| C2H7g10608 | 7:19,172,564-19,172,749 | + | C1H7g09660 | - | - | - | - | Detail |
| C2H7g24224 | 7:19,172,780-19,174,357 | + | C1H7g31740 | CX7g049549 | LOC_Os07g38960 | Os07g0577600 | - | Detail |
| C2H7g13296 | 7:19,175,815-19,180,743 | + | C1H7g25583 | CX7g046502 | LOC_Os07g38970 | Os07g0577700 | - | Detail |
| C2H7g18776 | 7:19,186,260-19,188,311 | - | C1H7g29452 | CX7g047232 | LOC_Os07g38990 | Os07g0577900 | - | Detail |
| C2H7g26214 | 7:19,206,461-19,210,534 | + | C1H7g08109 | CX7g048168 | LOC_Os07g39010 | Os07g0578200 | - | Detail |
| C2H7g18514 | 7:19,214,987-19,215,829 | - | - | - | LOC_Os07g39030 | Os07g0578333 | - | Detail |
| C2H7g04691 | 7:19,232,034-19,235,568 | + | C1H7g15727 | CX7g049026 | LOC_Os07g39070 | Os07g0578600 | - | Detail |
| C2H7g08247 | 7:19,235,983-19,243,398 | - | C1H7g17984 | CX7g046581 | LOC_Os07g39090 | Os07g0578800 | - | Detail |
| C2H7g03721 | 7:19,247,779-19,248,123 | - | C1H7g11751 | CX7g048261 | LOC_Os07g39190 | Os07g0580200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041818 | 6:20,782,368-20,784,715 | - | C1H6g22569 | C2H6g05068 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| CX6g044402 | 6:20,792,682-20,793,095 | + | - | - | - | - | - | Detail |
| CX6g042177 | 6:20,800,909-20,804,360 | + | C1H6g14736 | C2H6g14435 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| CX6g041181 | 6:20,806,200-20,809,471 | - | C1H6g19546 | C2H6g04094 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| CX6g043114 | 6:20,811,997-20,815,509 | - | C1H6g00043 | C2H6g04563 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| CX6g043884 | 6:20,821,706-20,822,176 | - | C1H6g15267 | - | LOC_Os06g40090 | Os06g0603300 | - | Detail |
| CX6g044727 | 6:20,832,407-20,833,189 | - | C1H6g03115 | - | LOC_Os06g40110 | Os06g0603400 | - | Detail |
| CX6g043946 | 6:20,834,310-20,838,350 | - | C1H6g11187 | C2H6g18680 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| CX6g044688 | 6:20,854,913-20,855,884 | - | C1H6g05477 | C2H6g21981 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| CX6g045934 | 6:20,864,295-20,867,107 | - | C1H6g20423 | C2H6g11228 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| CX6g045594 | 6:20,877,760-20,880,469 | + | C1H6g10180 | C2H6g26456 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| CX6g041305 | 6:20,884,845-20,887,842 | + | C1H6g27795 | C2H6g06437 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| CX6g042132 | 6:20,891,329-20,895,466 | + | C1H6g25357 | C2H6g13702 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| CX6g044895 | 6:20,906,491-20,907,205 | + | C1H6g04884 | C2H6g02651 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| CX6g044580 | 6:20,909,831-20,910,010 | + | - | - | - | - | - | Detail |
| CX6g045437 | 6:20,914,817-20,916,161 | - | C1H6g20614 | C2H6g13160 | LOC_Os06g40220 | - | - | Detail |
| CX6g045873 | 6:20,926,789-20,927,285 | + | C1H6g13328 | C2H6g05081 | LOC_Os06g40320 | - | - | Detail |
| CX6g045154 | 6:20,948,972-20,954,044 | - | C1H6g27028 | C2H6g19267 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g045451 | 6:20,969,605-20,974,700 | - | C1H6g27028 | C2H6g16209 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g041629 | 6:20,978,535-20,978,891 | + | - | - | - | - | - | Detail |