| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g14320 | 9:16,676,691-16,678,516 | + | C2H9g14100 | CX9g056111 | LOC_Os09g34000 | Os09g0515400 | - | Detail |
| C1H9g08780 | 9:16,679,883-16,684,399 | + | C2H9g05230 | CX9g057904 | LOC_Os09g34010 | Os09g0515500 | - | Detail |
| C1H9g19159 | 9:16,684,879-16,685,130 | - | - | CX9g057853 | LOC_Os09g34020 | Os09g0515550 | - | Detail |
| C1H9g05485 | 9:16,688,306-16,692,231 | - | C2H9g27279 | CX9g056978 | LOC_Os09g34040 | Os09g0515800 | - | Detail |
| C1H9g27580 | 9:16,692,135-16,696,322 | + | C2H9g04711 | CX9g054929 | LOC_Os09g34050 | - | - | Detail |
| C1H9g27552 | 9:16,698,867-16,702,381 | - | C2H9g12799 | CX9g058005 | LOC_Os09g34060 | Os09g0516200 | RF2A, RF2a, OsbZIP75 | Detail |
| C1H9g04624 | 9:16,705,905-16,713,228 | - | C2H9g03877 | CX9g056074 | LOC_Os09g34070 | Os09g0516300 | OsRRMh | Detail |
| C1H9g20602 | 9:16,714,264-16,718,655 | - | C2H9g11431 | CX9g055114 | LOC_Os09g34090 | Os09g0516500 | - | Detail |
| C1H9g24868 | 9:16,719,723-16,724,137 | - | C2H9g10691 | CX9g055424 | LOC_Os09g34100 | Os09g0516600 | - | Detail |
| C1H9g10392 | 9:16,725,084-16,731,775 | - | C2H9g29370 | CX9g057318 | LOC_Os09g34110 | Os09g0516700 | - | Detail |
| C1H9g04774 | 9:16,746,779-16,747,285 | + | C2H9g01227 | CX9g056340 | LOC_Os09g34120 | Os09g0516800 | - | Detail |
| C1H9g21496 | 9:16,748,002-16,754,981 | - | C2H9g04309 | CX9g055630 | LOC_Os09g34130 | Os09g0516900 | - | Detail |
| C1H9g24686 | 9:16,757,689-16,758,276 | + | C2H9g23647 | CX9g055207 | LOC_Os09g34140 | Os09g0517000 | - | Detail |
| C1H9g31842 | 9:16,759,028-16,763,342 | - | C2H9g23722 | CX9g056714 | LOC_Os09g34150 | Os09g0517100 | - | Detail |
| C1H9g07747 | 9:16,766,486-16,771,260 | - | C2H9g00445 | CX9g056407 | LOC_Os09g34160 | Os09g0517100 | - | Detail |
| C1H9g10630 | 9:16,774,841-16,779,312 | - | C2H9g05925 | CX9g055248 | LOC_Os09g34160 | Os09g0517200 | - | Detail |
| C1H9g08519 | 9:16,788,269-16,791,643 | + | C2H9g26309 | CX9g055677 | LOC_Os09g34180 | Os09g0517600 | OsFH15 | Detail |
| C1H9g18439 | 9:16,791,847-16,794,843 | - | C2H9g22292 | CX9g055625 | LOC_Os09g34190 | Os09g0517700 | - | Detail |
| C1H9g08831 | 9:16,795,719-16,797,834 | + | C2H9g25268 | CX9g055363 | LOC_Os09g34200 | Os09g0517800 | - | Detail |
| C1H9g31076 | 9:16,805,063-16,809,139 | + | C2H9g28432 | CX9g057128 | LOC_Os09g34214 | Os09g0517900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041818 | 6:20,782,368-20,784,715 | - | C1H6g22569 | C2H6g05068 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| CX6g044402 | 6:20,792,682-20,793,095 | + | - | - | - | - | - | Detail |
| CX6g042177 | 6:20,800,909-20,804,360 | + | C1H6g14736 | C2H6g14435 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| CX6g041181 | 6:20,806,200-20,809,471 | - | C1H6g19546 | C2H6g04094 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| CX6g043114 | 6:20,811,997-20,815,509 | - | C1H6g00043 | C2H6g04563 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| CX6g043884 | 6:20,821,706-20,822,176 | - | C1H6g15267 | - | LOC_Os06g40090 | Os06g0603300 | - | Detail |
| CX6g044727 | 6:20,832,407-20,833,189 | - | C1H6g03115 | - | LOC_Os06g40110 | Os06g0603400 | - | Detail |
| CX6g043946 | 6:20,834,310-20,838,350 | - | C1H6g11187 | C2H6g18680 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| CX6g044688 | 6:20,854,913-20,855,884 | - | C1H6g05477 | C2H6g21981 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| CX6g045934 | 6:20,864,295-20,867,107 | - | C1H6g20423 | C2H6g11228 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| CX6g045594 | 6:20,877,760-20,880,469 | + | C1H6g10180 | C2H6g26456 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| CX6g041305 | 6:20,884,845-20,887,842 | + | C1H6g27795 | C2H6g06437 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| CX6g042132 | 6:20,891,329-20,895,466 | + | C1H6g25357 | C2H6g13702 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| CX6g044895 | 6:20,906,491-20,907,205 | + | C1H6g04884 | C2H6g02651 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| CX6g044580 | 6:20,909,831-20,910,010 | + | - | - | - | - | - | Detail |
| CX6g045437 | 6:20,914,817-20,916,161 | - | C1H6g20614 | C2H6g13160 | LOC_Os06g40220 | - | - | Detail |
| CX6g045873 | 6:20,926,789-20,927,285 | + | C1H6g13328 | C2H6g05081 | LOC_Os06g40320 | - | - | Detail |
| CX6g045154 | 6:20,948,972-20,954,044 | - | C1H6g27028 | C2H6g19267 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g045451 | 6:20,969,605-20,974,700 | - | C1H6g27028 | C2H6g16209 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g041629 | 6:20,978,535-20,978,891 | + | - | - | - | - | - | Detail |