| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g04099 | 7:12,354,704-12,359,461 | + | C2H7g14936 | - | LOC_Os07g25700 | Os07g0438700 | - | Detail |
| C1H7g25390 | 7:12,372,168-12,377,735 | + | C2H7g28771 | CX7g047024 | LOC_Os07g25710 | Os07g0438800 | - | Detail |
| C1H7g13423 | 7:12,388,055-12,388,833 | + | C2H7g21460 | CX7g049854 | - | Os07g0439000 | - | Detail |
| C1H7g12906 | 7:12,396,730-12,403,274 | - | C2H7g05830 | CX7g048001 | LOC_Os07g25740 | Os07g0439100 | - | Detail |
| C1H7g22316 | 7:12,437,730-12,439,016 | - | - | - | LOC_Os07g25810 | Os07g0440100 | - | Detail |
| C1H7g26218 | 7:12,447,215-12,448,466 | - | - | - | - | - | - | Detail |
| C1H7g00661 | 7:12,449,223-12,453,337 | + | C2H7g10158 | CX7g047704 | LOC_Os07g26000 | Os07g0163200 | - | Detail |
| C1H7g20476 | 7:12,501,745-12,504,397 | + | C2H7g03650 | CX7g049677 | LOC_Os07g27370 | Os07g0186500 | - | Detail |
| C1H7g04730 | 7:12,545,403-12,546,193 | + | C2H7g09219 | CX7g047044 | LOC_Os07g26110 | Os07g0442900 | - | Detail |
| C1H7g14823 | 7:12,546,610-12,546,816 | + | C2H7g09219 | CX7g047044 | LOC_Os07g26110 | Os07g0442900 | - | Detail |
| C1H7g25284 | 7:12,548,822-12,549,524 | + | - | - | - | - | - | Detail |
| C1H7g15316 | 7:12,604,561-12,613,475 | + | C2H7g13124 | CX7g047404 | LOC_Os07g27770 | Os07g0627100 | - | Detail |
| C1H7g22404 | 7:12,651,128-12,660,316 | - | C2H7g21033 | CX7g049983 | LOC_Os07g26210 | Os07g0444000 | - | Detail |
| C1H7g14611 | 7:12,675,439-12,680,137 | + | C2H7g15268 | CX7g046951 | LOC_Os07g27370 | Os07g0481400 | - | Detail |
| C1H7g17489 | 7:12,685,223-12,691,996 | - | C2H7g16091 | CX7g048800 | LOC_Os07g26440 | Os07g0445600 | - | Detail |
| C1H7g26287 | 7:12,704,863-12,706,391 | + | C2H7g21985 | CX7g046816 | LOC_Os07g26460 | Os07g0445800 | - | Detail |
| C1H7g01225 | 7:12,710,550-12,711,980 | + | C2H7g23639 | CX7g048464 | LOC_Os07g26480 | Os07g0446000 | - | Detail |
| C1H7g09402 | 7:12,723,409-12,730,308 | - | C2H7g17928 | CX7g049738 | LOC_Os07g26490 | Os07g0446100 | - | Detail |
| C1H7g29725 | 7:12,804,581-12,805,342 | - | C2H7g24998 | - | LOC_Os07g26520 | Os07g0446900 | - | Detail |
| C1H7g27839 | 7:12,821,764-12,822,875 | - | C2H7g17685 | CX7g046361 | LOC_Os07g26550 | Os07g0446900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041818 | 6:20,782,368-20,784,715 | - | C1H6g22569 | C2H6g05068 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| CX6g044402 | 6:20,792,682-20,793,095 | + | - | - | - | - | - | Detail |
| CX6g042177 | 6:20,800,909-20,804,360 | + | C1H6g14736 | C2H6g14435 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| CX6g041181 | 6:20,806,200-20,809,471 | - | C1H6g19546 | C2H6g04094 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| CX6g043114 | 6:20,811,997-20,815,509 | - | C1H6g00043 | C2H6g04563 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| CX6g043884 | 6:20,821,706-20,822,176 | - | C1H6g15267 | - | LOC_Os06g40090 | Os06g0603300 | - | Detail |
| CX6g044727 | 6:20,832,407-20,833,189 | - | C1H6g03115 | - | LOC_Os06g40110 | Os06g0603400 | - | Detail |
| CX6g043946 | 6:20,834,310-20,838,350 | - | C1H6g11187 | C2H6g18680 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| CX6g044688 | 6:20,854,913-20,855,884 | - | C1H6g05477 | C2H6g21981 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| CX6g045934 | 6:20,864,295-20,867,107 | - | C1H6g20423 | C2H6g11228 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| CX6g045594 | 6:20,877,760-20,880,469 | + | C1H6g10180 | C2H6g26456 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| CX6g041305 | 6:20,884,845-20,887,842 | + | C1H6g27795 | C2H6g06437 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| CX6g042132 | 6:20,891,329-20,895,466 | + | C1H6g25357 | C2H6g13702 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| CX6g044895 | 6:20,906,491-20,907,205 | + | C1H6g04884 | C2H6g02651 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| CX6g044580 | 6:20,909,831-20,910,010 | + | - | - | - | - | - | Detail |
| CX6g045437 | 6:20,914,817-20,916,161 | - | C1H6g20614 | C2H6g13160 | LOC_Os06g40220 | - | - | Detail |
| CX6g045873 | 6:20,926,789-20,927,285 | + | C1H6g13328 | C2H6g05081 | LOC_Os06g40320 | - | - | Detail |
| CX6g045154 | 6:20,948,972-20,954,044 | - | C1H6g27028 | C2H6g19267 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g045451 | 6:20,969,605-20,974,700 | - | C1H6g27028 | C2H6g16209 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| CX6g041629 | 6:20,978,535-20,978,891 | + | - | - | - | - | - | Detail |