| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g31584 | 9:14,397,174-14,398,148 | - | C2H9g05249 | CX9g055140 | LOC_Os09g28750 | Os09g0462200 | - | Detail |
| C1H9g31193 | 9:14,398,159-14,399,079 | - | C2H9g03017 | - | - | Os09g0462301 | - | Detail |
| C1H9g18452 | 9:14,402,609-14,405,130 | + | C2H9g27701 | CX9g057311 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| C1H9g29610 | 9:14,407,442-14,407,735 | + | C2H9g19629 | CX9g056435 | LOC_Os09g28780 | Os08g0475500 | OsCEP6, OsCEP6.1 | Detail |
| C1H9g28013 | 9:14,417,767-14,421,876 | + | C2H9g05705 | CX9g055048 | LOC_Os09g28810 | Os09g0462700 | - | Detail |
| C1H9g15723 | 9:14,423,139-14,423,470 | + | C2H9g21321 | - | - | Os09g0462850 | - | Detail |
| C1H9g15089 | 9:14,425,555-14,428,291 | - | C2H9g19364 | CX9g057216 | LOC_Os09g28830 | Os09g0462875 | - | Detail |
| C1H9g24460 | 9:14,431,895-14,435,261 | - | C2H9g06754 | CX9g056317 | LOC_Os09g28840 | Os09g0463100 | - | Detail |
| C1H9g16758 | 9:14,443,505-14,446,049 | - | C2H9g26932 | - | - | - | - | Detail |
| C1H9g08405 | 9:14,445,917-14,450,400 | + | C2H9g17616 | CX9g055989 | LOC_Os09g28850 | Os09g0463300 | - | Detail |
| C1H9g27922 | 9:14,462,626-14,463,366 | + | C2H8g04634 | CX8g053678 | LOC_Os09g28880 | Os09g0463600 | - | Detail |
| C1H9g22383 | 9:14,469,635-14,470,756 | + | - | CX8g050532 | LOC_Os09g28890 | Os09g0463700 | - | Detail |
| C1H9g29908 | 9:14,477,978-14,478,205 | + | C2H9g06208 | CX9g058102 | LOC_Os09g28900 | Os09g0463900 | - | Detail |
| C1H9g13495 | 9:14,479,436-14,479,918 | + | C2H9g06208 | CX9g055813 | LOC_Os09g28900 | Os09g0410700 | - | Detail |
| C1H9g11908 | 9:14,481,560-14,486,123 | - | C2H9g27359 | CX9g057340 | LOC_Os09g28910 | Os09g0464000 | - | Detail |
| C1H9g03015 | 9:14,485,149-14,486,023 | + | - | - | - | Os09g0464066 | - | Detail |
| C1H9g26305 | 9:14,498,312-14,499,307 | - | C2H9g21979 | CX9g056952 | LOC_Os09g28930 | Os09g0464300 | - | Detail |
| C1H9g02656 | 9:14,510,601-14,518,761 | - | C2H9g10275 | CX9g056356 | LOC_Os09g28940 | Os09g0464400 | - | Detail |
| C1H9g11367 | 9:14,531,631-14,532,587 | - | C2H9g26296 | CX9g057742 | LOC_Os09g29050 | Os09g0465400 | - | Detail |
| C1H9g04483 | 9:14,534,358-14,537,056 | + | C2H9g25155 | CX9g057144 | LOC_Os09g29060 | Os09g0465500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045248 | 6:20,649,537-20,649,890 | - | C1H6g11800 | - | LOC_Os06g39800 | Os06g0599400 | - | Detail |
| CX6g043793 | 6:20,651,577-20,651,783 | - | - | - | - | - | - | Detail |
| CX6g042369 | 6:20,655,548-20,656,040 | + | C1H6g09853 | C2H6g29916 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| CX6g044449 | 6:20,673,066-20,673,215 | + | - | - | - | - | - | Detail |
| CX6g044306 | 6:20,676,537-20,679,246 | + | C1H6g20396 | C2H6g27907 | LOC_Os06g39870 | Os06g0600100 | - | Detail |
| CX6g041365 | 6:20,680,455-20,682,866 | + | C1H6g04213 | C2H6g00936 | LOC_Os06g39875 | Os06g0600301 | - | Detail |
| CX6g044804 | 6:20,697,498-20,699,523 | + | C1H6g16430 | C2H6g03874 | LOC_Os06g39880 | Os06g0600400 | CYP734A4 | Detail |
| CX6g044063 | 6:20,713,404-20,714,330 | - | - | C2H6g15182 | - | - | - | Detail |
| CX6g045729 | 6:20,717,333-20,718,746 | - | C1H6g03685 | C2H6g23732 | LOC_Os06g39900 | Os06g0600700 | - | Detail |
| CX6g043428 | 6:20,724,246-20,724,638 | - | C1H6g31234 | - | - | Os06g0600800 | - | Detail |
| CX6g044623 | 6:20,725,617-20,727,205 | + | C1H6g05226 | C2H6g20992 | LOC_Os06g39906 | Os06g0601000 | - | Detail |
| CX6g045301 | 6:20,730,115-20,730,405 | - | - | - | - | - | - | Detail |
| CX6g041715 | 6:20,733,749-20,734,192 | + | C1H6g14060 | - | LOC_Os06g39912 | Os06g0601100 | - | Detail |
| CX6g042659 | 6:20,742,523-20,745,284 | + | C1H6g03363 | C2H6g28120 | LOC_Os06g39960 | Os06g0601500 | OsbZIP48, OsHY5L2 | Detail |
| CX6g042583 | 6:20,746,420-20,749,667 | + | C1H6g30468 | C2H6g17237 | LOC_Os06g39970 | Os06g0601600 | OsCESA11 | Detail |
| CX6g043199 | 6:20,752,702-20,753,271 | - | - | - | - | Os10g0106550 | - | Detail |
| CX6g044674 | 6:20,760,081-20,765,047 | + | C1H6g18591 | C2H6g29039 | LOC_Os06g40020 | Os06g0602400 | OsRH52A | Detail |
| CX6g043985 | 6:20,767,626-20,770,067 | - | C1H6g13553 | C2H6g00455 | LOC_Os06g40030 | Os06g0602500 | SDRLK-38 | Detail |
| CX6g043878 | 6:20,774,006-20,776,297 | - | C1H6g13553 | C2H6g00455 | LOC_Os06g40030 | Os06g0602500 | SDRLK-38 | Detail |
| CX6g045252 | 6:20,780,000-20,781,548 | + | C1H6g01432 | C2H6g11572 | LOC_Os06g40040 | Os06g0602600 | - | Detail |