| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g29538 | 2:28,623,770-28,627,762 | - | C2H2g01303 | CX2g024594 | LOC_Os02g51060 | Os02g0744600 | OsCSLA6 | Detail |
| C1H2g23191 | 2:28,629,885-28,634,838 | - | C2H2g07487 | CX2g022323 | LOC_Os02g51070 | Os02g0744700 | OsSSII-2 | Detail |
| C1H2g05032 | 2:28,642,060-28,644,192 | + | C2H2g08168 | CX2g022360 | LOC_Os02g51080 | Os02g0744900 | LYL1, OsChl P, OsGGRI, OsGGR1 | Detail |
| C1H2g28990 | 2:28,649,362-28,652,256 | - | C2H2g17927 | CX2g022714 | LOC_Os02g51100 | Os02g0745000 | - | Detail |
| C1H2g29361 | 2:28,659,961-28,660,685 | + | C2H2g17969 | CX2g021804 | LOC_Os02g51110 | Os02g0745100 | LSI1, lsi1, NIP2-1, OsNIP2;1, NIP2;1, OsLsi1 | Detail |
| C1H2g08078 | 2:28,661,942-28,663,062 | + | C2H2g17969 | CX2g021804 | LOC_Os02g51110 | Os02g0745100 | LSI1, lsi1, NIP2-1, OsNIP2;1, NIP2;1, OsLsi1 | Detail |
| C1H2g10044 | 2:28,670,777-28,676,613 | - | C2H2g17512 | - | - | - | - | Detail |
| C1H2g22873 | 2:28,674,191-28,676,356 | + | C2H2g06955 | CX2g024809 | LOC_Os02g42970 | Os02g0745300 | - | Detail |
| C1H2g26267 | 2:28,680,083-28,682,042 | + | C2H2g19332 | CX2g024083 | LOC_Os02g51130 | Os02g0745400 | - | Detail |
| C1H2g29615 | 2:28,683,459-28,689,906 | + | C2H2g06018 | CX2g019686 | LOC_Os02g51140 | Os02g0745600 | OsNRP3 | Detail |
| C1H2g00830 | 2:28,690,893-28,693,076 | + | C2H2g18017 | CX2g024841 | LOC_Os02g51150 | Os02g0745700 | - | Detail |
| C1H2g30172 | 2:28,694,047-28,698,417 | + | C2H2g26607 | CX2g020073 | LOC_Os02g51160 | Os02g0745800 | - | Detail |
| C1H2g23262 | 2:28,701,317-28,704,403 | - | C2H2g23677 | CX2g022616 | LOC_Os02g51180 | Os02g0746000 | CUL3A, OsCUL3a | Detail |
| C1H2g29916 | 2:28,742,847-28,744,056 | - | - | - | LOC_Os02g58180 | - | - | Detail |
| C1H2g09862 | 2:28,762,511-28,764,482 | + | C2H2g20238 | CX2g024649 | LOC_Os02g51290 | Os02g0747500 | - | Detail |
| C1H2g31845 | 2:28,765,176-28,769,388 | - | C2H2g08371 | CX2g020731 | LOC_Os02g51300 | Os02g0747600 | - | Detail |
| C1H2g24533 | 2:28,776,335-28,776,828 | - | C2H2g00887 | CX2g020483 | LOC_Os02g51320 | Os02g0747900 | ILI5, OsBUL1, PGL2 | Detail |
| C1H2g27272 | 2:28,786,325-28,791,753 | - | C2H2g18570 | CX2g019270 | LOC_Os02g51330 | Os02g0748100 | - | Detail |
| C1H2g12274 | 2:28,796,040-28,798,803 | - | C2H2g16535 | CX2g021584 | LOC_Os02g51350 | Os02g0748300 | - | Detail |
| C1H2g22698 | 2:28,818,304-28,829,292 | + | C2H2g14137 | CX2g024543 | LOC_Os02g51400 | Os02g0749150 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042489 | 6:19,949,773-19,953,369 | + | C1H6g06948 | C2H6g09505 | LOC_Os06g38640 | Os06g0585982 | - | Detail |
| CX6g043572 | 6:19,977,457-19,981,058 | + | C1H6g08613 | C2H6g19952 | LOC_Os06g38590 | Os06g0585950 | - | Detail |
| CX6g044822 | 6:19,991,545-19,993,142 | + | C1H8g07439 | - | - | - | - | Detail |
| CX6g044962 | 6:19,998,995-19,999,144 | + | - | - | - | - | - | Detail |
| CX6g041763 | 6:20,084,215-20,087,582 | + | - | C2H6g02065 | LOC_Os06g39460 | Os06g0595433 | - | Detail |
| CX6g045528 | 6:20,088,762-20,089,594 | - | C1H6g06836 | C2H6g10010 | LOC_Os06g38710 | Os06g0587100 | - | Detail |
| CX6g043710 | 6:20,097,655-20,101,148 | + | C1H6g23549 | C2H6g15569 | LOC_Os06g38730 | Os06g0587000 | - | Detail |
| CX6g044698 | 6:20,111,982-20,115,467 | + | C1H6g22418 | C2H6g10263 | LOC_Os06g38760 | Os06g0587200 | - | Detail |
| CX6g042512 | 6:20,133,895-20,134,047 | + | - | - | - | - | - | Detail |
| CX6g041779 | 6:20,217,238-20,220,742 | + | C1H6g27226 | C2H6g29191 | LOC_Os06g38930 | Os06g0588800 | OsCLV2c | Detail |
| CX6g042926 | 6:20,225,573-20,226,139 | - | - | - | - | - | - | Detail |
| CX6g045956 | 6:20,226,617-20,228,407 | - | - | C2H6g26175 | - | - | - | Detail |
| CX6g042261 | 6:20,228,392-20,230,094 | + | C1H1g13664 | C2H1g14203 | LOC_Os06g39624 | Os06g0635500 | - | Detail |
| CX6g041336 | 6:20,231,286-20,232,627 | - | C1H9g00124 | C2H6g05392 | LOC_Os12g07170 | Os06g0597250 | - | Detail |
| CX6g043426 | 6:20,245,974-20,247,134 | - | C1H6g04658 | C2H6g07810 | LOC_Os06g38940 | Os06g0588900 | - | Detail |
| CX6g041607 | 6:20,250,644-20,250,898 | - | - | - | - | - | - | Detail |
| CX6g041801 | 6:20,252,224-20,259,671 | - | C1H6g22807 | C2H6g26491 | LOC_Os06g38950 | Os06g0589300 | - | Detail |
| CX6g045459 | 6:20,265,859-20,268,590 | + | C1H6g22963 | C2H6g01085 | LOC_Os06g38960 | Os06g0589500 | - | Detail |
| CX6g044412 | 6:20,278,251-20,282,411 | + | C1H6g29875 | C2H6g26129 | LOC_Os06g38970 | Os06g0589600 | OsCLV2d | Detail |
| CX6g044301 | 6:20,283,121-20,287,415 | - | C1H6g12291 | C2H6g29605 | LOC_Os06g38980 | Os06g0589700 | - | Detail |