| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g05639 | 3:30,882,766-30,882,960 | - | C2H3g00892 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C1H3g08848 | 3:30,883,122-30,884,802 | - | C2H3g03004 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C1H3g16443 | 3:30,886,963-30,889,346 | - | C2H3g02014 | CX3g025433 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| C1H3g00668 | 3:30,889,611-30,892,801 | + | C2H3g19484 | CX3g029604 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C1H3g17982 | 3:30,901,091-30,901,796 | + | C2H3g13882 | - | - | Os03g0796000 | - | Detail |
| C1H3g06155 | 3:30,904,898-30,906,624 | + | C2H3g08936 | CX3g029140 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| C1H3g17510 | 3:30,908,070-30,908,327 | + | - | - | - | - | - | Detail |
| C1H3g22799 | 3:30,925,580-30,926,198 | - | C2H3g19170 | CX3g029920 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| C1H3g12446 | 3:30,926,884-30,928,201 | - | C2H3g21611 | CX3g028585 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| C1H3g01827 | 3:30,931,559-30,933,936 | - | C2H3g18356 | CX3g026109 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| C1H3g17865 | 3:30,940,398-30,940,876 | + | - | - | - | - | - | Detail |
| C1H3g26452 | 3:30,943,982-30,944,992 | + | C2H4g07739 | CX3g025705 | - | Os03g0168800 | - | Detail |
| C1H3g31311 | 3:30,946,560-30,949,428 | + | C2H3g24067 | CX3g026507 | - | - | - | Detail |
| C1H3g10470 | 3:30,963,999-30,966,262 | + | C2H3g06838 | CX3g027699 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| C1H3g27596 | 3:30,977,861-30,984,244 | + | C2H3g07985 | CX3g028795 | LOC_Os03g58240 | Os03g0796800 | - | Detail |
| C1H3g15009 | 3:30,984,601-30,988,966 | - | C2H3g15466 | CX3g028970 | LOC_Os03g58250 | Os03g0796900 | REB, OsZIP33, RISBZ2, OsbZIP33 | Detail |
| C1H3g17969 | 3:30,992,592-30,996,090 | - | C2H3g10564 | CX3g025677 | LOC_Os03g58260 | Os03g0797300 | - | Detail |
| C1H3g11238 | 3:30,999,028-31,001,284 | - | C2H3g29626 | CX3g025677 | LOC_Os03g58290 | Os03g0797300 | - | Detail |
| C1H3g02359 | 3:31,005,407-31,009,821 | - | C2H3g15812 | CX3g025677 | LOC_Os03g58300 | Os03g0797300 | - | Detail |
| C1H3g02823 | 3:31,013,247-31,014,934 | - | C2H3g24914 | CX3g025677 | LOC_Os03g58320 | Os03g0797300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044344 | 6:19,443,738-19,446,428 | - | C1H6g23835 | C2H6g01286 | LOC_Os06g37500 | Os06g0572300 | OsCKX10 | Detail |
| CX6g043094 | 6:19,449,121-19,451,452 | - | C1H6g22289 | C2H6g12789 | LOC_Os06g37510 | Os06g0572400 | OsTET9 | Detail |
| CX6g044699 | 6:19,467,072-19,467,476 | - | C1H6g09131 | - | LOC_Os06g37530 | - | - | Detail |
| CX6g045231 | 6:19,472,445-19,472,612 | + | - | - | - | - | - | Detail |
| CX6g044008 | 6:19,482,284-19,482,856 | - | C1H6g06805 | - | - | - | - | Detail |
| CX6g045743 | 6:19,496,805-19,501,922 | + | C1H6g15116 | C2H6g26877 | LOC_Os06g37560 | Os06g0573600 | - | Detail |
| CX6g041259 | 6:19,504,985-19,505,353 | - | C1H6g06589 | C2H6g07492 | LOC_Os06g34020 | Os06g0531000 | - | Detail |
| CX6g043804 | 6:19,507,366-19,508,232 | + | C1H6g17696 | - | LOC_Os06g37570 | Os06g0573800 | - | Detail |
| CX6g043562 | 6:19,509,588-19,510,688 | - | C1H6g05998 | C2H6g05809 | LOC_Os06g37590 | Os06g0573900 | - | Detail |
| CX6g044273 | 6:19,512,634-19,513,584 | + | C1H6g13411 | - | LOC_Os06g37600 | Os06g0574000 | - | Detail |
| CX6g045069 | 6:19,519,273-19,524,483 | + | C1H6g01577 | C2H6g00071 | LOC_Os06g37610 | Os06g0574100 | - | Detail |
| CX6g042224 | 6:19,525,502-19,529,328 | - | C1H6g19063 | C2H6g21856 | LOC_Os06g37620 | Os06g0574200 | - | Detail |
| CX6g045306 | 6:19,548,819-19,557,314 | - | C1H6g25361 | C2H6g29932 | LOC_Os06g37640 | Os06g0574400 | - | Detail |
| CX6g043907 | 6:19,562,827-19,568,404 | + | C1H6g20652 | C2H6g06718 | LOC_Os06g37660 | Os06g0574500 | PP2A-1 | Detail |
| CX6g042779 | 6:19,578,649-19,581,060 | + | C1H6g16404 | C2H6g09895 | LOC_Os06g37690 | Os06g0575000 | MAK8 | Detail |
| CX6g044617 | 6:19,588,727-19,591,114 | + | C1H6g20035 | C2H6g18814 | LOC_Os06g37750 | Os06g0575000 | MAK8 | Detail |
| CX6g044047 | 6:19,600,320-19,602,731 | + | C1H6g20035 | C2H6g00626 | LOC_Os06g37750 | Os06g0575400 | SDRLK-5 | Detail |
| CX6g042089 | 6:19,641,055-19,641,566 | - | - | - | - | - | - | Detail |
| CX6g044080 | 6:19,651,826-19,652,110 | - | - | - | - | - | - | Detail |
| CX6g044345 | 6:19,662,452-19,662,897 | + | - | - | - | - | - | Detail |