| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g19241 | 11:3,507,960-3,512,265 | + | C2H11g04878 | CX11g014057 | LOC_Os11g08100 | Os11g0183900 | - | Detail |
| C1H11g29158 | 11:3,516,036-3,516,833 | + | - | - | - | Os11g0184100 | - | Detail |
| C1H11g30718 | 11:3,521,013-3,522,019 | + | C2H11g19537 | - | LOC_Os11g08120 | Os11g0184300 | - | Detail |
| C1H11g24574 | 11:3,524,850-3,525,511 | + | C2H11g08483 | CX9g055632 | LOC_Os09g31430 | Os11g0184300 | - | Detail |
| C1H11g21737 | 11:3,525,578-3,526,383 | + | C2H11g15003 | CX11g013993 | LOC_Os11g08160 | Os11g0184300 | - | Detail |
| C1H11g22341 | 11:3,530,988-3,536,589 | + | C2H11g02113 | CX11g014057 | LOC_Os11g08190 | Os11g0184600 | - | Detail |
| C1H11g14966 | 11:3,541,222-3,541,640 | + | C2H11g09425 | - | LOC_Os11g08180 | Os11g0184600 | - | Detail |
| C1H11g29947 | 11:3,542,233-3,542,923 | + | C2H11g25637 | - | LOC_Os11g08190 | Os11g0184600 | - | Detail |
| C1H11g30694 | 11:3,545,393-3,548,317 | + | C2H11g25637 | - | LOC_Os11g08190 | Os11g0183900 | - | Detail |
| C1H11g25147 | 11:3,550,336-3,552,402 | + | C2H11g25637 | CX11g014057 | LOC_Os11g08200 | Os11g0184800 | OsAsp1 | Detail |
| C1H11g09597 | 11:3,554,634-3,556,836 | - | C2H11g02712 | CX11g013912 | LOC_Os11g08210 | Os11g0184900 | NAC5, OsNAC5, NAC71, ONAC071, ONAC009, ONAC9, ONAC020, ONAC20, OnNAC5*, OnNAC5, OsNAC5/ONAC009 | Detail |
| C1H11g06049 | 11:3,567,206-3,568,194 | + | C2H11g30229 | CX11g014413 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| C1H11g16668 | 11:3,569,196-3,569,507 | + | C2H11g30229 | CX11g010990 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| C1H11g22894 | 11:3,633,288-3,638,155 | + | C2H11g18389 | CX11g013131 | LOC_Os11g08300 | Os11g0186200 | - | Detail |
| C1H11g28283 | 11:3,639,438-3,642,896 | + | C2H11g28689 | CX11g014402 | LOC_Os11g08314 | Os11g0186300 | - | Detail |
| C1H11g04327 | 11:3,643,665-3,644,999 | + | C2H11g07463 | CX11g011762 | LOC_Os11g08314 | Os11g0186300 | - | Detail |
| C1H11g17958 | 11:3,645,662-3,655,613 | - | C2H11g08181 | CX11g012890 | LOC_Os11g08330 | Os11g0186400 | OsPolδ1 | Detail |
| C1H11g07924 | 11:3,660,820-3,661,307 | - | C2H11g08701 | CX11g011992 | - | - | - | Detail |
| C1H11g02795 | 11:3,665,691-3,667,687 | + | C2H11g25550 | CX11g012905 | LOC_Os11g08340 | Os11g0186500 | - | Detail |
| C1H11g17459 | 11:3,685,165-3,686,454 | + | C2H12g10711 | CX11g010865 | LOC_Os11g08370 | Os11g0186800 | OsPHT4;6-1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044344 | 6:19,443,738-19,446,428 | - | C1H6g23835 | C2H6g01286 | LOC_Os06g37500 | Os06g0572300 | OsCKX10 | Detail |
| CX6g043094 | 6:19,449,121-19,451,452 | - | C1H6g22289 | C2H6g12789 | LOC_Os06g37510 | Os06g0572400 | OsTET9 | Detail |
| CX6g044699 | 6:19,467,072-19,467,476 | - | C1H6g09131 | - | LOC_Os06g37530 | - | - | Detail |
| CX6g045231 | 6:19,472,445-19,472,612 | + | - | - | - | - | - | Detail |
| CX6g044008 | 6:19,482,284-19,482,856 | - | C1H6g06805 | - | - | - | - | Detail |
| CX6g045743 | 6:19,496,805-19,501,922 | + | C1H6g15116 | C2H6g26877 | LOC_Os06g37560 | Os06g0573600 | - | Detail |
| CX6g041259 | 6:19,504,985-19,505,353 | - | C1H6g06589 | C2H6g07492 | LOC_Os06g34020 | Os06g0531000 | - | Detail |
| CX6g043804 | 6:19,507,366-19,508,232 | + | C1H6g17696 | - | LOC_Os06g37570 | Os06g0573800 | - | Detail |
| CX6g043562 | 6:19,509,588-19,510,688 | - | C1H6g05998 | C2H6g05809 | LOC_Os06g37590 | Os06g0573900 | - | Detail |
| CX6g044273 | 6:19,512,634-19,513,584 | + | C1H6g13411 | - | LOC_Os06g37600 | Os06g0574000 | - | Detail |
| CX6g045069 | 6:19,519,273-19,524,483 | + | C1H6g01577 | C2H6g00071 | LOC_Os06g37610 | Os06g0574100 | - | Detail |
| CX6g042224 | 6:19,525,502-19,529,328 | - | C1H6g19063 | C2H6g21856 | LOC_Os06g37620 | Os06g0574200 | - | Detail |
| CX6g045306 | 6:19,548,819-19,557,314 | - | C1H6g25361 | C2H6g29932 | LOC_Os06g37640 | Os06g0574400 | - | Detail |
| CX6g043907 | 6:19,562,827-19,568,404 | + | C1H6g20652 | C2H6g06718 | LOC_Os06g37660 | Os06g0574500 | PP2A-1 | Detail |
| CX6g042779 | 6:19,578,649-19,581,060 | + | C1H6g16404 | C2H6g09895 | LOC_Os06g37690 | Os06g0575000 | MAK8 | Detail |
| CX6g044617 | 6:19,588,727-19,591,114 | + | C1H6g20035 | C2H6g18814 | LOC_Os06g37750 | Os06g0575000 | MAK8 | Detail |
| CX6g044047 | 6:19,600,320-19,602,731 | + | C1H6g20035 | C2H6g00626 | LOC_Os06g37750 | Os06g0575400 | SDRLK-5 | Detail |
| CX6g042089 | 6:19,641,055-19,641,566 | - | - | - | - | - | - | Detail |
| CX6g044080 | 6:19,651,826-19,652,110 | - | - | - | - | - | - | Detail |
| CX6g044345 | 6:19,662,452-19,662,897 | + | - | - | - | - | - | Detail |