| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g31714 | 3:3,524,674-3,527,364 | - | C2H3g07082 | CX3g025943 | LOC_Os03g19900 | Os03g0176300 | - | Detail |
| C1H3g29070 | 3:3,531,557-3,532,000 | + | - | CX3g029598 | LOC_Os03g07950 | Os03g0176500 | - | Detail |
| C1H3g15283 | 3:3,535,670-3,538,136 | - | C2H3g21895 | CX3g030266 | LOC_Os03g07960 | Os03g0176700 | - | Detail |
| C1H3g23456 | 3:3,539,632-3,543,426 | - | C2H3g00013 | CX3g029368 | LOC_Os03g07970 | Os03g0176800 | - | Detail |
| C1H3g29339 | 3:3,545,081-3,545,401 | - | C2H3g04928 | CX3g028066 | LOC_Os03g07980 | Os03g0176900 | - | Detail |
| C1H3g11831 | 3:3,547,433-3,550,737 | + | C2H3g13522 | CX3g029737 | LOC_Os03g07990 | Os03g0177000 | - | Detail |
| C1H3g26527 | 3:3,551,746-3,555,617 | + | C2H3g03958 | CX3g030435 | LOC_Os03g08000 | Os03g0177300 | - | Detail |
| C1H3g16670 | 3:3,556,288-3,559,286 | + | C2H3g29734 | CX3g025284 | LOC_Os03g08050 | Os03g0177900 | - | Detail |
| C1H3g02996 | 3:3,562,431-3,564,801 | + | C2H3g13691 | CX3g028070 | LOC_Os03g08050 | Os03g0177500 | OsEF1A | Detail |
| C1H3g00802 | 3:3,571,950-3,575,270 | + | C2H3g13691 | CX3g028070 | LOC_Os03g08050 | Os03g0177400 | - | Detail |
| C1H3g04475 | 3:3,578,437-3,581,379 | + | C2H3g13691 | CX3g025284 | LOC_Os03g08010 | Os03g0177500 | OsEF1A | Detail |
| C1H3g20350 | 3:3,581,457-3,588,568 | - | C2H3g00449 | CX3g028367 | LOC_Os03g08070 | Os03g0178100 | - | Detail |
| C1H3g15649 | 3:3,591,581-3,593,353 | + | C2H3g25180 | CX3g027428 | LOC_Os03g08080 | Os03g0178200 | - | Detail |
| C1H3g27650 | 3:3,593,500-3,594,715 | - | C2H3g26133 | CX3g029291 | LOC_Os03g08090 | Os03g0178300 | - | Detail |
| C1H3g28165 | 3:3,595,771-3,598,977 | - | C2H3g08383 | CX3g026682 | LOC_Os03g08100 | Os03g0178400 | - | Detail |
| C1H3g16865 | 3:3,600,829-3,605,538 | - | C2H3g20309 | CX3g026682 | LOC_Os03g08110 | Os03g0178500 | - | Detail |
| C1H3g20528 | 3:3,609,374-3,616,052 | + | C2H3g04420 | CX3g027590 | LOC_Os03g08140 | Os03g0179000 | OsTTLL12 | Detail |
| C1H3g07823 | 3:3,616,375-3,617,052 | + | C2H3g12070 | CX3g025130 | LOC_Os03g08150 | Os03g0179100 | - | Detail |
| C1H3g18493 | 3:3,617,875-3,619,387 | + | C2H3g20817 | CX3g029368 | LOC_Os03g07750 | Os03g0179200 | - | Detail |
| C1H3g14467 | 3:3,619,519-3,620,575 | + | C2H3g00013 | CX3g029368 | LOC_Os03g07970 | Os03g0176800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042535 | 6:19,219,883-19,223,937 | - | C1H6g28567 | C2H6g02242 | LOC_Os06g37160 | Os06g0568000 | - | Detail |
| CX6g042255 | 6:19,227,543-19,232,154 | - | C1H6g24215 | C2H6g07187 | LOC_Os06g37180 | Os06g0568200 | - | Detail |
| CX6g045705 | 6:19,256,691-19,257,326 | + | C1H6g18419 | - | LOC_Os06g37190 | Os06g0568400 | - | Detail |
| CX6g041824 | 6:19,263,464-19,271,750 | - | C1H6g14082 | C2H6g09052 | LOC_Os06g37224 | Os06g0568600 | OsKOL5, CYP701A9 | Detail |
| CX6g044856 | 6:19,272,623-19,272,943 | - | C1H6g16431 | - | - | - | - | Detail |
| CX6g045904 | 6:19,274,688-19,274,921 | + | - | - | - | - | - | Detail |
| CX6g045332 | 6:19,296,394-19,300,997 | - | C1H6g22956 | C2H6g09927 | LOC_Os06g37224 | Os06g0569500 | KO4, OsKO4, OsKOL4, KOS1, CYP701A8, OsKO2 | Detail |
| CX6g043261 | 6:19,309,272-19,309,969 | + | C1H6g21110 | C2H6g05317 | - | - | - | Detail |
| CX6g041893 | 6:19,320,533-19,320,913 | - | - | - | - | - | - | Detail |
| CX6g044759 | 6:19,325,906-19,334,465 | - | C1H6g30266 | C2H6g02574 | LOC_Os06g37364 | Os06g0570566 | - | Detail |
| CX6g045040 | 6:19,346,001-19,349,145 | - | C1H6g28276 | C2H6g17532 | LOC_Os06g37364 | Os06g0570100 | D35, OsKOL2, CYP701A6, OsKO2 | Detail |
| CX6g044296 | 6:19,363,568-19,369,344 | - | C1H6g30266 | C2H6g02574 | LOC_Os06g37364 | Os06g0570566 | - | Detail |
| CX6g043330 | 6:19,388,495-19,391,861 | + | C1H6g06179 | C2H6g06249 | LOC_Os06g37410 | Os06g0570900 | - | Detail |
| CX6g041937 | 6:19,392,652-19,396,619 | - | C1H6g12983 | C2H6g25933 | LOC_Os06g37420 | Os06g0571100 | OsHDAC6, HDA706 | Detail |
| CX6g043308 | 6:19,401,248-19,404,434 | + | C1H6g13252 | C2H6g23040 | LOC_Os06g37430 | Os06g0571300 | - | Detail |
| CX6g042768 | 6:19,407,022-19,410,190 | - | C1H6g22488 | C2H6g16813 | LOC_Os06g37440 | Os06g0571400 | - | Detail |
| CX6g044696 | 6:19,421,293-19,421,553 | - | - | - | - | - | - | Detail |
| CX6g043753 | 6:19,421,936-19,422,493 | - | - | - | - | - | - | Detail |
| CX6g044613 | 6:19,426,631-19,428,029 | + | C1H6g11157 | C2H6g11123 | LOC_Os06g37450 | Os06g0571800 | OsGATA16 | Detail |
| CX6g045088 | 6:19,440,870-19,441,385 | + | - | - | - | - | - | Detail |