| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g08740 | 4:5,837,219-5,840,950 | + | C1H4g27268 | CX4g033727 | LOC_Os04g11760 | Os04g0193950 | - | Detail |
| C2H4g24115 | 4:5,863,103-5,863,795 | + | C1H4g00127 | CX4g034119 | - | - | - | Detail |
| C2H4g01433 | 4:5,877,746-5,884,336 | - | C1H4g11202 | CX4g032821 | LOC_Os04g11820 | Os04g0194500 | - | Detail |
| C2H4g23993 | 4:5,907,269-5,914,707 | + | C1H4g19431 | CX4g034386 | LOC_Os04g11880 | Os04g0195000 | - | Detail |
| C2H4g11331 | 4:5,933,106-5,934,673 | + | C1H4g25694 | CX4g035968 | LOC_Os08g24980 | - | - | Detail |
| C2H4g08911 | 4:5,953,713-5,956,448 | + | C1H4g19937 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C2H4g17260 | 4:5,977,877-5,980,574 | - | C1H4g07183 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C2H4g14785 | 4:6,313,890-6,316,207 | - | C1H4g14978 | CX4g034359 | LOC_Os04g12390 | Os04g0330200 | - | Detail |
| C2H4g03396 | 4:6,335,305-6,336,315 | + | - | CX4g032415 | LOC_Os04g12430 | Os04g0200700 | - | Detail |
| C2H4g26962 | 4:6,336,510-6,342,139 | + | - | CX4g032415 | LOC_Os04g12430 | - | - | Detail |
| C2H4g06118 | 4:6,346,027-6,353,840 | - | - | CX4g031446 | - | - | - | Detail |
| C2H4g10504 | 4:6,362,734-6,369,160 | - | C1H4g16105 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C2H4g26946 | 4:6,396,910-6,405,329 | - | C1H4g17374 | CX4g036106 | LOC_Os04g12499 | Os04g0201500 | OsAAT30 | Detail |
| C2H4g03852 | 4:6,416,375-6,420,043 | - | C1H4g14971 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C2H4g15231 | 4:6,427,164-6,428,727 | + | - | - | - | - | - | Detail |
| C2H4g12193 | 4:6,428,170-6,430,605 | - | C1H4g17048 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| C2H4g26627 | 4:6,448,193-6,448,576 | - | - | - | - | Os04g0617200 | - | Detail |
| C2H4g18743 | 4:6,463,388-6,466,416 | - | C1H4g18742 | CX4g032311 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| C2H4g09802 | 4:6,477,598-6,478,724 | + | C1H4g19896 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C2H4g10760 | 4:6,479,684-6,480,995 | + | C1H4g09867 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002308 | 1:25,239,226-25,240,137 | - | C1H1g24886 | C2H1g15847 | LOC_Os01g49320 | Os01g0687400 | - | Detail |
| CX1g002582 | 1:25,245,453-25,249,018 | + | C1H1g25078 | C2H1g12257 | LOC_Os01g49330 | Os01g0687500 | - | Detail |
| CX1g004001 | 1:25,251,907-25,254,126 | - | C1H1g30547 | C2H1g24499 | LOC_Os01g49340 | Os01g0687600 | - | Detail |
| CX1g004559 | 1:25,254,820-25,257,582 | - | C1H1g13249 | C2H1g11352 | LOC_Os01g49350 | Os01g0687700 | - | Detail |
| CX1g000658 | 1:25,259,473-25,262,771 | - | C1H1g18645 | C2H1g17351 | LOC_Os01g49360 | Os01g0687800 | - | Detail |
| CX1g006320 | 1:25,264,374-25,264,925 | - | C1H1g03295 | C2H1g02129 | - | - | - | Detail |
| CX1g000285 | 1:25,266,861-25,269,845 | - | C1H1g06737 | C2H1g03797 | LOC_Os01g49380 | Os01g0688200 | - | Detail |
| CX1g005023 | 1:25,281,027-25,281,197 | + | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g004700 | 1:25,284,883-25,285,800 | + | C1H1g20404 | C2H1g06476 | LOC_Os01g49390 | Os01g0688300 | - | Detail |
| CX1g004118 | 1:25,299,656-25,300,459 | - | C1H1g05158 | C2H1g16538 | LOC_Os01g49410 | Os01g0688600 | - | Detail |
| CX1g004763 | 1:25,302,460-25,303,563 | - | C1H1g14442 | C2H1g05242 | LOC_Os01g49430 | Os01g0688900 | - | Detail |
| CX1g005316 | 1:25,308,149-25,309,239 | + | C1H1g07960 | C2H1g18382 | LOC_Os01g49440 | Os01g0689000 | - | Detail |
| CX1g001421 | 1:25,315,014-25,315,232 | + | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g001526 | 1:25,320,320-25,320,595 | + | - | - | - | - | - | Detail |
| CX1g000580 | 1:25,323,145-25,333,689 | - | C1H1g27870 | C2H1g18558 | LOC_Os01g49470 | Os01g0689451 | OsHRZ1 | Detail |
| CX1g003352 | 1:25,342,931-25,346,088 | - | C1H1g26809 | C2H1g12129 | LOC_Os01g49490 | Os01g0689600 | - | Detail |
| CX1g005650 | 1:25,360,387-25,363,335 | + | C1H1g26834 | C2H1g09258 | LOC_Os01g49510 | Os01g0689800 | - | Detail |
| CX1g005155 | 1:25,364,137-25,368,918 | - | C1H1g04543 | C2H1g12314 | LOC_Os01g49529 | Os01g0601200 | - | Detail |
| CX1g003945 | 1:25,364,272-25,365,467 | + | - | - | - | Os01g0689975 | - | Detail |
| CX1g000238 | 1:25,399,911-25,400,222 | + | - | - | - | Os11g0117300 | - | Detail |