| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g03913 | 5:23,600,852-23,603,088 | + | C2H5g10460 | CX5g036982 | LOC_Os05g50220 | Os05g0578000 | - | Detail |
| C1H5g20150 | 5:23,607,102-23,608,025 | - | C2H5g03748 | CX5g037412 | LOC_Os05g50230 | Os05g0578100 | - | Detail |
| C1H5g22642 | 5:23,614,448-23,617,680 | + | C2H5g13618 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C1H5g05740 | 5:23,619,939-23,620,858 | + | C2H5g26536 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C1H5g30673 | 5:23,622,238-23,626,286 | - | C2H5g20774 | CX5g039590 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| C1H5g18644 | 5:23,628,267-23,629,130 | + | C2H5g01414 | CX5g038128 | - | - | - | Detail |
| C1H5g30824 | 5:23,638,998-23,639,922 | + | C2H5g24268 | CX5g037556 | LOC_Os05g50270 | Os05g0578900 | NL1, nl1, OsGATA15, SNFL1 | Detail |
| C1H5g28939 | 5:23,640,680-23,645,549 | - | C2H5g28493 | CX5g037802 | LOC_Os05g50280 | Os05g0579000 | OsERD5 | Detail |
| C1H5g17437 | 5:23,649,126-23,650,124 | + | C2H5g09709 | CX5g037992 | LOC_Os05g50290 | Os05g0579100 | - | Detail |
| C1H5g00625 | 5:23,652,781-23,654,715 | + | C2H5g24355 | CX5g039421 | LOC_Os05g50300 | Os05g0579200 | - | Detail |
| C1H5g28773 | 5:23,659,950-23,660,675 | + | C2H5g30078 | CX5g038909 | LOC_Os05g50310 | Os05g0579300 | - | Detail |
| C1H5g25217 | 5:23,672,989-23,673,594 | - | C2H5g16972 | CX5g037463 | LOC_Os05g50340 | Os05g0579600 | - | Detail |
| C1H5g24861 | 5:23,677,756-23,678,150 | - | C2H5g06063 | CX5g040775 | LOC_Os05g50350 | Os05g0579700 | - | Detail |
| C1H5g08314 | 5:23,684,030-23,686,749 | + | C2H5g20886 | CX5g040870 | LOC_Os05g50360 | Os05g0579800 | - | Detail |
| C1H5g24542 | 5:23,694,433-23,701,629 | + | C2H5g02301 | CX5g038555 | LOC_Os05g50370 | Os05g0579900 | - | Detail |
| C1H5g04263 | 5:23,702,286-23,707,469 | - | C2H5g26213 | CX5g040137 | LOC_Os05g50380 | Os05g0580000 | OsAGPL1, OsAPL3 | Detail |
| C1H5g02145 | 5:23,717,421-23,721,366 | + | C2H5g13644 | CX5g037650 | LOC_Os05g50410 | - | - | Detail |
| C1H5g24080 | 5:23,724,763-23,726,820 | + | C2H5g28264 | CX5g040658 | LOC_Os05g50460 | Os05g0581300 | - | Detail |
| C1H5g06864 | 5:23,737,397-23,738,215 | + | C2H5g17272 | CX5g037923 | LOC_Os05g50470 | Os05g0581700 | - | Detail |
| C1H5g11608 | 5:23,743,056-23,751,412 | + | C2H5g15909 | CX5g037805 | LOC_Os05g50480 | Os05g0581800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002308 | 1:25,239,226-25,240,137 | - | C1H1g24886 | C2H1g15847 | LOC_Os01g49320 | Os01g0687400 | - | Detail |
| CX1g002582 | 1:25,245,453-25,249,018 | + | C1H1g25078 | C2H1g12257 | LOC_Os01g49330 | Os01g0687500 | - | Detail |
| CX1g004001 | 1:25,251,907-25,254,126 | - | C1H1g30547 | C2H1g24499 | LOC_Os01g49340 | Os01g0687600 | - | Detail |
| CX1g004559 | 1:25,254,820-25,257,582 | - | C1H1g13249 | C2H1g11352 | LOC_Os01g49350 | Os01g0687700 | - | Detail |
| CX1g000658 | 1:25,259,473-25,262,771 | - | C1H1g18645 | C2H1g17351 | LOC_Os01g49360 | Os01g0687800 | - | Detail |
| CX1g006320 | 1:25,264,374-25,264,925 | - | C1H1g03295 | C2H1g02129 | - | - | - | Detail |
| CX1g000285 | 1:25,266,861-25,269,845 | - | C1H1g06737 | C2H1g03797 | LOC_Os01g49380 | Os01g0688200 | - | Detail |
| CX1g005023 | 1:25,281,027-25,281,197 | + | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g004700 | 1:25,284,883-25,285,800 | + | C1H1g20404 | C2H1g06476 | LOC_Os01g49390 | Os01g0688300 | - | Detail |
| CX1g004118 | 1:25,299,656-25,300,459 | - | C1H1g05158 | C2H1g16538 | LOC_Os01g49410 | Os01g0688600 | - | Detail |
| CX1g004763 | 1:25,302,460-25,303,563 | - | C1H1g14442 | C2H1g05242 | LOC_Os01g49430 | Os01g0688900 | - | Detail |
| CX1g005316 | 1:25,308,149-25,309,239 | + | C1H1g07960 | C2H1g18382 | LOC_Os01g49440 | Os01g0689000 | - | Detail |
| CX1g001421 | 1:25,315,014-25,315,232 | + | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g001526 | 1:25,320,320-25,320,595 | + | - | - | - | - | - | Detail |
| CX1g000580 | 1:25,323,145-25,333,689 | - | C1H1g27870 | C2H1g18558 | LOC_Os01g49470 | Os01g0689451 | OsHRZ1 | Detail |
| CX1g003352 | 1:25,342,931-25,346,088 | - | C1H1g26809 | C2H1g12129 | LOC_Os01g49490 | Os01g0689600 | - | Detail |
| CX1g005650 | 1:25,360,387-25,363,335 | + | C1H1g26834 | C2H1g09258 | LOC_Os01g49510 | Os01g0689800 | - | Detail |
| CX1g005155 | 1:25,364,137-25,368,918 | - | C1H1g04543 | C2H1g12314 | LOC_Os01g49529 | Os01g0601200 | - | Detail |
| CX1g003945 | 1:25,364,272-25,365,467 | + | - | - | - | Os01g0689975 | - | Detail |
| CX1g000238 | 1:25,399,911-25,400,222 | + | - | - | - | Os11g0117300 | - | Detail |