| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g06589 | 3:19,779,082-19,779,789 | + | C1H3g26388 | CX3g027290 | LOC_Os03g38490 | Os03g0581600 | - | Detail |
| C2H3g11410 | 3:19,786,089-19,790,222 | + | C1H3g13237 | CX3g026435 | LOC_Os03g38500 | Os03g0581650 | - | Detail |
| C2H3g06922 | 3:19,793,124-19,796,821 | + | C1H3g17977 | CX3g028447 | LOC_Os03g38520 | Os03g0581800 | - | Detail |
| C2H3g10966 | 3:19,802,125-19,804,059 | + | C1H3g14219 | CX3g027412 | LOC_Os03g38540 | Os03g0582000 | - | Detail |
| C2H3g04652 | 3:19,805,126-19,807,078 | - | C1H3g04338 | CX3g028106 | LOC_Os03g38580 | Os03g0582100 | - | Detail |
| C2H3g02001 | 3:19,810,123-19,813,682 | - | C1H3g18500 | CX3g025759 | LOC_Os03g38590 | Os03g0582200 | - | Detail |
| C2H3g21731 | 3:19,814,546-19,819,217 | - | C1H3g03271 | CX3g025759 | LOC_Os03g38600 | Os03g0582300 | - | Detail |
| C2H3g25116 | 3:19,850,361-19,852,815 | + | C1H3g13726 | CX3g029359 | - | - | - | Detail |
| C2H3g10218 | 3:19,854,174-19,855,859 | - | C1H3g28190 | CX3g028203 | LOC_Os03g38710 | Os03g0583600 | OsPERK3 | Detail |
| C2H3g00374 | 3:19,862,418-19,862,882 | - | C1H3g28190 | CX3g028203 | LOC_Os03g38710 | Os03g0583600 | OsPERK3 | Detail |
| C2H3g24537 | 3:19,867,155-19,870,266 | + | C1H3g03200 | CX3g026919 | LOC_Os03g38720 | Os03g0583700 | OsUMP1 | Detail |
| C2H3g24800 | 3:19,875,886-19,878,055 | + | C1H3g23310 | CX3g030948 | LOC_Os03g38730 | Os03g0583800 | - | Detail |
| C2H3g29289 | 3:19,878,360-19,893,009 | - | C1H3g04436 | CX3g030903 | LOC_Os03g38740 | Os03g0583900 | - | Detail |
| C2H3g12332 | 3:19,901,010-19,901,665 | + | C1H3g11527 | CX3g028495 | LOC_Os03g38790 | Os03g0568500 | - | Detail |
| C2H3g13791 | 3:19,909,018-19,910,330 | + | C1H3g01309 | CX3g028700 | LOC_Os03g38790 | Os03g0568500 | - | Detail |
| C2H3g24653 | 3:19,911,161-19,912,750 | - | C1H3g23323 | CX3g030820 | LOC_Os03g38800 | Os03g0584400 | - | Detail |
| C2H3g23071 | 3:19,913,095-19,913,820 | - | - | - | - | - | - | Detail |
| C2H3g19485 | 3:19,922,006-19,923,422 | - | C1H3g11030 | CX3g025305 | - | - | - | Detail |
| C2H3g10367 | 3:19,923,603-19,924,292 | - | C1H3g22207 | CX3g025305 | - | - | - | Detail |
| C2H3g17956 | 3:19,973,161-19,979,164 | - | C1H3g12087 | CX3g028633 | LOC_Os03g38930 | Os03g0586300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041653 | 6:18,434,833-18,435,627 | + | - | - | LOC_Os06g36030 | Os06g0554100 | MEL, OsMEL | Detail |
| CX6g041858 | 6:18,437,240-18,437,950 | - | C1H6g10481 | C2H6g26819 | LOC_Os06g36040 | Os06g0554200 | - | Detail |
| CX6g041635 | 6:18,440,696-18,441,964 | - | C1H6g08855 | - | LOC_Os06g36050 | Os06g0554300 | - | Detail |
| CX6g045221 | 6:18,463,502-18,464,317 | - | - | - | LOC_Os06g36070 | Os06g0554600 | - | Detail |
| CX6g044312 | 6:18,475,145-18,484,047 | + | C1H6g30409 | C2H6g09581 | LOC_Os06g36080 | Os06g0554700 | - | Detail |
| CX6g044731 | 6:18,485,062-18,497,882 | - | C1H6g12887 | C2H6g20811 | LOC_Os06g36090 | Os06g0554800 | - | Detail |
| CX6g042280 | 6:18,510,674-18,511,209 | + | - | C2H1g25308 | LOC_Os01g48339 | - | - | Detail |
| CX6g045470 | 6:18,512,410-18,515,704 | + | C1H6g18940 | C2H6g19558 | LOC_Os06g36160 | Os06g0555400 | - | Detail |
| CX6g041699 | 6:18,516,510-18,519,822 | - | C1H6g27356 | C2H6g01553 | LOC_Os06g36170 | Os06g0555500 | - | Detail |
| CX6g045708 | 6:18,520,444-18,520,858 | + | - | C2H6g01158 | - | - | - | Detail |
| CX6g045532 | 6:18,524,512-18,525,006 | + | - | - | - | - | - | Detail |
| CX6g045859 | 6:18,530,906-18,533,686 | - | C1H6g25734 | C2H4g27076 | LOC_Os04g55280 | Os04g0646050 | - | Detail |
| CX6g041977 | 6:18,534,729-18,536,172 | - | C1H6g05986 | C2H6g02285 | LOC_Os01g63890 | Os04g0646100 | - | Detail |
| CX6g044043 | 6:18,539,179-18,539,685 | + | - | - | - | - | - | Detail |
| CX6g042108 | 6:18,552,906-18,553,079 | + | - | - | - | - | - | Detail |
| CX6g044183 | 6:18,555,338-18,561,840 | + | C1H6g09123 | C2H6g03125 | LOC_Os06g36180 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| CX6g042707 | 6:18,586,146-18,587,791 | + | C1H6g04383 | C2H6g20565 | LOC_Os06g36210 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| CX6g043932 | 6:18,589,350-18,593,393 | - | C1H6g20721 | C2H6g04951 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| CX6g043875 | 6:18,595,699-18,601,362 | - | C1H6g19530 | C2H6g00925 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| CX6g045462 | 6:18,607,922-18,608,532 | + | C1H6g25463 | C2H6g03428 | LOC_Os06g36240 | Os06g0556600 | - | Detail |