| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01081 | 1:22,019,265-22,021,877 | + | C1H1g09495 | CX1g004316 | LOC_Os01g43070 | Os01g0617900 | - | Detail |
| C2H1g29487 | 1:22,027,049-22,029,545 | - | C1H1g19006 | CX1g000678 | LOC_Os01g43090 | Os01g0618100 | - | Detail |
| C2H1g23236 | 1:22,033,292-22,037,919 | + | C1H1g27169 | CX1g005980 | LOC_Os01g43100 | Os01g0618200 | - | Detail |
| C2H1g21672 | 1:22,044,724-22,047,689 | - | C1H1g02475 | CX1g006386 | LOC_Os01g43110 | Os01g0618300 | - | Detail |
| C2H1g25813 | 1:22,048,126-22,048,416 | - | C1H1g02475 | CX1g006386 | LOC_Os01g43110 | Os01g0618300 | - | Detail |
| C2H1g12742 | 1:22,052,470-22,056,112 | + | C1H1g04496 | CX1g006588 | LOC_Os01g43120 | Os01g0618400 | - | Detail |
| C2H1g17892 | 1:22,056,648-22,059,952 | + | C1H1g16334 | CX1g000664 | LOC_Os01g43130 | Os01g0618500 | - | Detail |
| C2H1g09612 | 1:22,066,034-22,069,819 | + | C1H1g15522 | CX1g003763 | LOC_Os01g43140 | Os01g0618700 | - | Detail |
| C2H1g07623 | 1:22,073,369-22,079,924 | - | C1H1g21837 | CX1g004860 | LOC_Os01g43150 | Os01g0618800 | - | Detail |
| C2H1g03928 | 1:22,096,300-22,099,458 | + | C1H1g10339 | CX1g000234 | LOC_Os01g43160 | Os01g0618900 | - | Detail |
| C2H1g12410 | 1:22,100,234-22,105,913 | - | C1H1g09667 | CX1g004677 | LOC_Os01g43170 | Os01g0619000 | - | Detail |
| C2H1g00059 | 1:22,115,697-22,120,265 | + | C1H1g17436 | CX1g002128 | LOC_Os01g43220 | Os01g0619800 | - | Detail |
| C2H1g14322 | 1:22,120,940-22,121,932 | - | C1H1g19388 | CX1g001323 | LOC_Os01g43230 | Os01g0619100 | OsTCL1 | Detail |
| C2H1g27084 | 1:22,129,609-22,135,863 | - | C1H1g31852 | CX1g002659 | LOC_Os01g43250 | Os01g0620100 | OsSEH1 | Detail |
| C2H1g09076 | 1:22,140,284-22,141,732 | - | C1H1g28205 | CX1g002901 | LOC_Os01g43270 | Os01g0620800 | - | Detail |
| C2H1g21293 | 1:22,147,504-22,149,867 | - | C1H1g28205 | CX1g002697 | LOC_Os01g43270 | Os01g0620800 | - | Detail |
| C2H1g07535 | 1:22,151,572-22,152,015 | - | C1H1g28205 | CX1g002697 | LOC_Os01g43270 | Os01g0620800 | - | Detail |
| C2H1g10530 | 1:22,182,613-22,186,096 | - | C1H1g23014 | CX1g003892 | LOC_Os01g43320 | Os01g0621200 | - | Detail |
| C2H1g12995 | 1:22,186,459-22,186,912 | - | C1H1g23014 | CX1g003892 | LOC_Os01g43320 | Os01g0621200 | - | Detail |
| C2H1g18065 | 1:22,191,724-22,196,810 | - | C1H1g28187 | CX1g005932 | LOC_Os01g43330 | Os01g0621300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041653 | 6:18,434,833-18,435,627 | + | - | - | LOC_Os06g36030 | Os06g0554100 | MEL, OsMEL | Detail |
| CX6g041858 | 6:18,437,240-18,437,950 | - | C1H6g10481 | C2H6g26819 | LOC_Os06g36040 | Os06g0554200 | - | Detail |
| CX6g041635 | 6:18,440,696-18,441,964 | - | C1H6g08855 | - | LOC_Os06g36050 | Os06g0554300 | - | Detail |
| CX6g045221 | 6:18,463,502-18,464,317 | - | - | - | LOC_Os06g36070 | Os06g0554600 | - | Detail |
| CX6g044312 | 6:18,475,145-18,484,047 | + | C1H6g30409 | C2H6g09581 | LOC_Os06g36080 | Os06g0554700 | - | Detail |
| CX6g044731 | 6:18,485,062-18,497,882 | - | C1H6g12887 | C2H6g20811 | LOC_Os06g36090 | Os06g0554800 | - | Detail |
| CX6g042280 | 6:18,510,674-18,511,209 | + | - | C2H1g25308 | LOC_Os01g48339 | - | - | Detail |
| CX6g045470 | 6:18,512,410-18,515,704 | + | C1H6g18940 | C2H6g19558 | LOC_Os06g36160 | Os06g0555400 | - | Detail |
| CX6g041699 | 6:18,516,510-18,519,822 | - | C1H6g27356 | C2H6g01553 | LOC_Os06g36170 | Os06g0555500 | - | Detail |
| CX6g045708 | 6:18,520,444-18,520,858 | + | - | C2H6g01158 | - | - | - | Detail |
| CX6g045532 | 6:18,524,512-18,525,006 | + | - | - | - | - | - | Detail |
| CX6g045859 | 6:18,530,906-18,533,686 | - | C1H6g25734 | C2H4g27076 | LOC_Os04g55280 | Os04g0646050 | - | Detail |
| CX6g041977 | 6:18,534,729-18,536,172 | - | C1H6g05986 | C2H6g02285 | LOC_Os01g63890 | Os04g0646100 | - | Detail |
| CX6g044043 | 6:18,539,179-18,539,685 | + | - | - | - | - | - | Detail |
| CX6g042108 | 6:18,552,906-18,553,079 | + | - | - | - | - | - | Detail |
| CX6g044183 | 6:18,555,338-18,561,840 | + | C1H6g09123 | C2H6g03125 | LOC_Os06g36180 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| CX6g042707 | 6:18,586,146-18,587,791 | + | C1H6g04383 | C2H6g20565 | LOC_Os06g36210 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| CX6g043932 | 6:18,589,350-18,593,393 | - | C1H6g20721 | C2H6g04951 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| CX6g043875 | 6:18,595,699-18,601,362 | - | C1H6g19530 | C2H6g00925 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| CX6g045462 | 6:18,607,922-18,608,532 | + | C1H6g25463 | C2H6g03428 | LOC_Os06g36240 | Os06g0556600 | - | Detail |