| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g11621 | 1:28,908,449-28,912,093 | - | C2H1g27726 | CX1g002848 | LOC_Os01g56130 | Os01g0766900 | OsCSLC1 | Detail |
| C1H1g23773 | 1:28,917,622-28,922,860 | - | C2H1g25186 | CX1g006079 | LOC_Os01g56140 | Os01g0767000 | OsNMCP1 | Detail |
| C1H1g07882 | 1:28,924,508-28,928,418 | - | C2H1g12650 | CX1g002490 | LOC_Os01g56150 | Os01g0767100 | - | Detail |
| C1H1g20009 | 1:28,934,059-28,937,050 | + | C2H1g17994 | CX1g005086 | LOC_Os01g56180 | Os01g0767600 | - | Detail |
| C1H1g00590 | 1:28,937,596-28,947,938 | + | C2H1g02356 | CX1g007067 | LOC_Os01g56190 | Os01g0767700 | - | Detail |
| C1H1g02614 | 1:28,954,358-28,957,527 | + | C2H1g28755 | CX1g005068 | LOC_Os01g56200 | Os01g0767900 | - | Detail |
| C1H1g14323 | 1:28,960,257-28,969,822 | - | C2H1g23081 | CX1g000886 | LOC_Os01g45880 | Os01g0646800 | - | Detail |
| C1H1g10000 | 1:28,970,638-28,972,135 | - | C2H1g28135 | CX1g005201 | LOC_Os01g56210 | Os01g0768100 | - | Detail |
| C1H1g17993 | 1:28,973,342-28,979,604 | - | C2H1g30374 | CX1g001137 | LOC_Os01g56230 | Os01g0768200 | - | Detail |
| C1H1g11693 | 1:28,981,958-28,983,986 | - | C2H1g26550 | CX1g002315 | LOC_Os01g56235 | Os01g0768300 | - | Detail |
| C1H1g01409 | 1:28,985,770-28,986,138 | + | C2H1g30140 | CX1g002605 | LOC_Os01g56240 | Os01g0768333 | OsSAUR2 | Detail |
| C1H1g26530 | 1:28,994,882-29,003,824 | + | C2H1g24802 | CX1g000267 | LOC_Os01g56290 | Os01g0768700 | - | Detail |
| C1H1g30094 | 1:29,018,079-29,024,756 | + | C2H1g11170 | CX1g001998 | LOC_Os01g56300 | Os01g0769000 | - | Detail |
| C1H1g21992 | 1:29,025,536-29,028,390 | + | C2H1g06053 | CX1g000941 | LOC_Os01g56310 | Os05g0511500 | - | Detail |
| C1H1g21169 | 1:29,039,506-29,045,221 | + | C2H1g08866 | CX1g000768 | LOC_Os01g56320 | Os01g0769200 | - | Detail |
| C1H1g11804 | 1:29,050,520-29,053,213 | + | C2H1g11294 | CX1g006832 | LOC_Os01g56330 | Os01g0769700 | - | Detail |
| C1H1g24029 | 1:29,055,074-29,061,484 | + | C2H1g27214 | CX1g006851 | LOC_Os01g56350 | Os01g0769900 | TCM1 | Detail |
| C1H1g10932 | 1:29,060,139-29,064,004 | - | C2H1g25114 | CX1g006734 | LOC_Os01g56360 | Os01g0770000 | - | Detail |
| C1H1g12311 | 1:29,066,256-29,072,055 | - | C2H1g18480 | CX1g006846 | LOC_Os01g56360 | Os01g0770000 | - | Detail |
| C1H1g07110 | 1:29,080,501-29,082,096 | - | C2H10g16117 | CX1g000584 | LOC_Os01g56380 | Os01g0770200 | TYDC, TyDC, OsTyDC, OsTYDC, TDC | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044643 | 6:18,153,486-18,154,316 | - | - | - | LOC_Os06g35770 | Os06g0550800 | - | Detail |
| CX6g044667 | 6:18,169,922-18,174,775 | - | C1H6g07327 | C2H6g10555 | LOC_Os06g35814 | Os06g0551400 | OsRab11, ric2 | Detail |
| CX6g045817 | 6:18,181,011-18,181,595 | + | C1H6g25938 | C2H6g03448 | LOC_Os06g35830 | Os06g0551500 | - | Detail |
| CX6g043856 | 6:18,182,357-18,182,842 | - | - | - | - | - | - | Detail |
| CX6g044683 | 6:18,184,508-18,188,108 | + | C1H6g00646 | C2H6g10352 | LOC_Os06g35850 | Os06g0551800 | MAK7 | Detail |
| CX6g044947 | 6:18,191,384-18,191,740 | + | - | - | - | - | - | Detail |
| CX6g041164 | 6:18,233,299-18,233,745 | - | - | - | - | - | - | Detail |
| CX6g041292 | 6:18,244,940-18,246,013 | + | C1H6g15247 | C2H6g15987 | LOC_Os06g33350 | Os06g0524700 | - | Detail |
| CX6g041627 | 6:18,256,964-18,257,318 | - | C1H6g02183 | C2H6g21675 | LOC_Os06g35890 | - | - | Detail |
| CX6g043086 | 6:18,258,913-18,261,502 | + | C1H6g30465 | C2H6g02875 | LOC_Os06g35900 | Os06g0552300 | - | Detail |
| CX6g043043 | 6:18,264,094-18,269,003 | - | C1H6g29774 | C2H6g19580 | LOC_Os06g35910 | Os06g0552400 | - | Detail |
| CX6g042888 | 6:18,279,121-18,280,300 | + | C1H6g12612 | C2H6g00486 | LOC_Os06g35930 | Os06g0552700 | - | Detail |
| CX6g045398 | 6:18,282,170-18,282,409 | - | - | - | - | - | - | Detail |
| CX6g042912 | 6:18,293,238-18,295,403 | - | C1H6g30558 | C2H6g07179 | LOC_Os06g35940 | Os06g0552900 | OsFTL12 | Detail |
| CX6g045232 | 6:18,318,637-18,320,889 | - | C1H6g12386 | C2H6g23400 | LOC_Os06g35960 | Os06g0553100 | - | Detail |
| CX6g041276 | 6:18,349,929-18,350,944 | - | C1H6g10321 | C2H6g02377 | LOC_Os06g35970 | Os06g0553200 | - | Detail |
| CX6g042126 | 6:18,368,168-18,368,344 | + | - | - | - | - | - | Detail |
| CX6g044256 | 6:18,416,591-18,417,394 | + | C1H6g05477 | C2H6g04144 | LOC_Os06g36000 | Os06g0553700 | - | Detail |
| CX6g045888 | 6:18,425,545-18,426,279 | - | C1H6g22773 | C2H6g25179 | LOC_Os06g36010 | Os06g0553800 | - | Detail |
| CX6g042008 | 6:18,428,639-18,428,947 | + | C1H7g20360 | C2H7g10129 | LOC_Os04g53020 | - | - | Detail |