| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g18413 | 4:29,693,561-29,699,613 | - | C1H4g12099 | CX4g034422 | LOC_Os04g57670 | Os04g0672700 | - | Detail |
| C2H4g13935 | 4:29,701,445-29,704,747 | + | C1H4g02898 | CX4g031387 | LOC_Os04g57680 | Os04g0672800 | - | Detail |
| C2H4g25125 | 4:29,705,783-29,708,184 | + | C1H4g21333 | CX4g034255 | LOC_Os04g57690 | Os04g0672900 | - | Detail |
| C2H4g28032 | 4:29,709,880-29,714,931 | - | C1H4g29753 | CX4g032895 | LOC_Os04g57700 | Os04g0673000 | - | Detail |
| C2H4g17256 | 4:29,737,558-29,738,174 | + | C1H4g17441 | CX4g036002 | LOC_Os04g57720 | Os04g0673300 | RR6, OsRR6, rr6, Rra6, OsRRA6 | Detail |
| C2H4g16666 | 4:29,745,422-29,749,700 | - | C1H4g06545 | CX4g033276 | LOC_Os04g57730 | Os04g0673400 | - | Detail |
| C2H4g21541 | 4:29,752,035-29,752,662 | - | C1H4g12522 | CX4g032931 | LOC_Os04g57750 | Os04g0673800 | - | Detail |
| C2H4g03386 | 4:29,757,348-29,758,304 | - | C1H4g09977 | - | LOC_Os04g57760 | Os04g0674000 | - | Detail |
| C2H4g22422 | 4:29,766,013-29,768,955 | - | C1H4g25879 | CX4g033668 | LOC_Os04g57780 | Os04g0674100 | - | Detail |
| C2H4g06265 | 4:29,774,553-29,775,787 | + | C1H4g19205 | CX4g033580 | LOC_Os04g57790 | Os04g0674200 | - | Detail |
| C2H4g15166 | 4:29,776,488-29,781,050 | - | C1H4g22285 | CX4g034130 | LOC_Os04g57800 | Os04g0674300 | - | Detail |
| C2H4g17817 | 4:29,783,015-29,783,610 | - | C1H4g01102 | - | - | Os04g0674350 | - | Detail |
| C2H4g23831 | 4:29,783,738-29,786,479 | + | C1H4g13095 | CX4g032486 | LOC_Os04g57810 | Os04g0674400 | OsDRE2a | Detail |
| C2H4g13778 | 4:29,789,504-29,794,076 | + | C1H4g14562 | CX4g036032 | LOC_Os04g57819 | Os04g0674450 | - | Detail |
| C2H4g19163 | 4:29,798,804-29,801,306 | + | C1H4g20705 | - | - | - | - | Detail |
| C2H4g22750 | 4:29,802,403-29,805,885 | - | C1H4g25678 | CX4g034412 | LOC_Os04g57840 | Os04g0674600 | - | Detail |
| C2H4g08185 | 4:29,806,506-29,808,620 | - | C1H4g14424 | CX4g034499 | LOC_Os04g57850 | Os04g0674700 | OsBIABP1 | Detail |
| C2H4g18901 | 4:29,812,600-29,815,642 | - | C1H4g31604 | CX4g031749 | LOC_Os04g57860 | Os04g0674800 | OsRHC | Detail |
| C2H4g07191 | 4:29,818,808-29,824,861 | - | C1H4g22329 | CX4g034095 | LOC_Os04g57870 | Os04g0675000 | - | Detail |
| C2H4g13536 | 4:29,834,270-29,853,732 | + | C1H4g08555 | CX4g033430 | - | Os04g0675300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041357 | 6:17,819,421-17,820,170 | - | C1H6g30568 | C2H6g20054 | LOC_Os06g35060 | Os06g0542300 | - | Detail |
| CX6g042549 | 6:17,822,236-17,822,529 | + | - | - | - | Os06g0542350 | - | Detail |
| CX6g045198 | 6:17,840,357-17,840,725 | - | C1H6g27761 | C2H6g27993 | LOC_Os06g35070 | - | - | Detail |
| CX6g042722 | 6:17,843,059-17,843,748 | + | - | - | LOC_Os06g35080 | Os06g0542600 | - | Detail |
| CX6g045969 | 6:17,847,051-17,847,710 | - | C1H6g13202 | - | LOC_Os06g35090 | Os06g0542701 | - | Detail |
| CX6g045515 | 6:17,868,691-17,871,004 | - | C1H6g19218 | C2H6g25035 | LOC_Os06g35140 | Os06g0543200 | - | Detail |
| CX6g041182 | 6:17,900,529-17,901,782 | - | C1H6g17045 | C2H6g09935 | LOC_Os06g35160 | Os06g0543400 | - | Detail |
| CX6g043782 | 6:17,914,708-17,917,301 | + | C1H6g16257 | C2H6g06658 | LOC_Os06g35200 | Os06g0544100 | - | Detail |
| CX6g042664 | 6:17,930,825-17,930,974 | + | - | - | - | - | - | Detail |
| CX6g044540 | 6:17,955,665-17,957,003 | - | C1H6g25454 | C2H6g10733 | LOC_Os06g35320 | Os06g0545800 | - | Detail |
| CX6g042328 | 6:17,966,872-17,968,210 | - | C1H6g25454 | C2H6g19736 | LOC_Os06g35320 | Os06g0545400 | - | Detail |
| CX6g043021 | 6:17,973,770-17,977,320 | - | C1H6g09194 | C2H6g06968 | LOC_Os06g35410 | Os06g0545900 | - | Detail |
| CX6g045491 | 6:17,984,011-17,990,501 | + | C1H6g20890 | C2H6g13401 | LOC_Os06g35470 | Os06g0546400 | - | Detail |
| CX6g045439 | 6:17,992,917-17,994,052 | - | C1H6g17199 | C2H6g01494 | LOC_Os06g35480 | Os06g0546500 | - | Detail |
| CX6g043503 | 6:18,003,387-18,004,555 | - | C1H6g03317 | C2H6g17122 | LOC_Os06g35490 | Os06g0547100 | - | Detail |
| CX6g043877 | 6:18,014,727-18,015,988 | - | C1H6g15968 | C2H6g10936 | LOC_Os06g35520 | Os06g0547400 | - | Detail |
| CX6g044267 | 6:18,020,211-18,020,492 | - | - | - | LOC_Os06g35524 | Os06g0547500 | - | Detail |
| CX6g043693 | 6:18,026,240-18,032,408 | + | C1H6g07884 | C2H6g25019 | LOC_Os06g35530 | Os06g0547900 | - | Detail |
| CX6g042086 | 6:18,046,379-18,050,489 | - | C1H6g04849 | C2H6g07411 | LOC_Os06g35540 | Os06g0548000 | - | Detail |
| CX6g045454 | 6:18,144,510-18,146,875 | - | C1H6g25462 | C2H6g01886 | LOC_Os06g35730 | Os06g0550000 | - | Detail |