| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21680 | 3:31,573,549-31,577,267 | - | C2H3g29438 | CX3g025915 | LOC_Os03g59450 | Os03g0809100 | - | Detail |
| C1H3g00029 | 3:31,578,427-31,580,804 | + | C2H3g20629 | CX3g029386 | LOC_Os03g59460 | Os03g0809200 | - | Detail |
| C1H3g24410 | 3:31,581,594-31,585,210 | - | C2H3g29142 | CX3g030061 | LOC_Os03g59470 | Os03g0809300 | - | Detail |
| C1H3g00154 | 3:31,585,689-31,590,452 | - | C2H3g26798 | CX3g026207 | LOC_Os03g59480 | Os03g0809400 | - | Detail |
| C1H3g24704 | 3:31,595,581-31,600,379 | + | C2H3g14868 | CX3g029129 | LOC_Os03g59530 | Os03g0809700 | - | Detail |
| C1H3g10761 | 3:31,601,003-31,602,117 | - | C2H3g12384 | CX3g029771 | LOC_Os03g59540 | Os03g0809800 | - | Detail |
| C1H3g08226 | 3:31,603,634-31,608,354 | + | C2H3g15000 | CX3g027672 | LOC_Os03g59550 | Os03g0809900 | OsY14b, Y14b, Tsunagi, RBM8 | Detail |
| C1H3g24094 | 3:31,614,612-31,615,670 | + | C2H3g26577 | CX3g030604 | LOC_Os03g59570 | Os03g0810100 | - | Detail |
| C1H3g21092 | 3:31,627,097-31,629,523 | - | C2H3g13200 | CX3g027297 | LOC_Os03g59580 | Os03g0810300 | - | Detail |
| C1H3g11302 | 3:31,636,858-31,642,955 | - | C2H3g12399 | CX3g028362 | LOC_Os03g59590 | Os03g0810600 | - | Detail |
| C1H3g11617 | 3:31,650,667-31,652,531 | - | C2H3g16986 | CX3g030481 | LOC_Os03g59600 | Os03g0810700 | - | Detail |
| C1H3g30674 | 3:31,653,404-31,655,322 | + | C2H3g19706 | CX3g028870 | LOC_Os03g59610 | Os03g0810800 | OsABA2 | Detail |
| C1H3g01412 | 3:31,655,676-31,660,165 | - | C2H3g30149 | CX3g027301 | LOC_Os03g59620 | Os03g0810900 | - | Detail |
| C1H3g18901 | 3:31,662,066-31,668,698 | + | C2H3g14154 | CX3g030819 | LOC_Os03g59640 | Os03g0811100 | - | Detail |
| C1H3g26787 | 3:31,669,197-31,674,200 | + | C2H3g24154 | CX3g031200 | LOC_Os03g59650 | Os03g0811200 | - | Detail |
| C1H3g09735 | 3:31,677,228-31,679,230 | + | C2H3g07522 | CX3g028699 | LOC_Os03g59660 | Os03g0811300 | - | Detail |
| C1H3g09793 | 3:31,681,847-31,683,197 | + | C2H3g08986 | CX3g027906 | LOC_Os03g59670 | Os03g0811400 | - | Detail |
| C1H3g28609 | 3:31,694,355-31,698,287 | - | C2H3g03566 | CX3g026137 | LOC_Os03g59680 | Os03g0811500 | - | Detail |
| C1H3g20712 | 3:31,702,998-31,703,927 | - | C2H3g09547 | CX3g028706 | LOC_Os03g59690 | Os03g0811550 | - | Detail |
| C1H3g19969 | 3:31,704,308-31,707,244 | - | C2H3g28941 | CX3g027737 | LOC_Os03g59700 | Os03g0811600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041250 | 6:16,987,726-16,989,964 | + | C1H6g11127 | C2H6g10591 | LOC_Os06g33450 | Os06g0526100 | OsSPCH1 | Detail |
| CX6g041558 | 6:17,017,842-17,021,041 | - | C1H6g01850 | C2H6g25956 | LOC_Os06g33480 | Os06g0526400 | - | Detail |
| CX6g041995 | 6:17,023,342-17,025,905 | - | C1H6g24388 | C2H6g14289 | LOC_Os06g33490 | Os06g0526466 | - | Detail |
| CX6g042022 | 6:17,031,998-17,039,398 | - | C1H6g23940 | C2H6g04702 | LOC_Os06g33520 | Os06g0526600 | OsABP | Detail |
| CX6g044893 | 6:17,041,749-17,049,842 | - | C1H6g16477 | C2H6g18786 | LOC_Os06g33530 | Os06g0526700 | - | Detail |
| CX6g042208 | 6:17,053,669-17,060,692 | + | C1H6g20198 | C2H6g26749 | LOC_Os06g33570 | Os06g0527100 | OsCNGC2 | Detail |
| CX6g042157 | 6:17,067,156-17,077,063 | + | C1H6g11291 | C2H6g25193 | LOC_Os06g33600 | Os06g0527300 | OsCNGC3 | Detail |
| CX6g044844 | 6:17,083,853-17,085,340 | - | C1H6g01453 | C2H6g23259 | LOC_Os06g33690 | Os06g0527800 | OsPYL/RCAR7 | Detail |
| CX6g045555 | 6:17,098,610-17,098,759 | + | - | - | LOC_Os12g33650 | Os06g0518100 | - | Detail |
| CX6g045481 | 6:17,112,484-17,114,240 | - | C1H6g30132 | C2H6g28862 | LOC_Os06g33690 | Os06g0528300 | - | Detail |
| CX6g045189 | 6:17,138,662-17,142,735 | + | C1H6g10226 | C2H6g24028 | LOC_Os06g33710 | Os06g0528600 | OsSPMS1, OsSPDS2 | Detail |
| CX6g045947 | 6:17,143,444-17,144,913 | - | C1H6g06370 | C2H6g22034 | LOC_Os06g33720 | Os06g0528700 | - | Detail |
| CX6g044583 | 6:17,170,416-17,170,652 | - | - | - | LOC_Os10g24610 | - | - | Detail |
| CX6g043989 | 6:17,175,734-17,179,171 | + | C1H6g18646 | C2H6g22002 | LOC_Os06g33810 | Os06g0529800 | OsUBR7 | Detail |
| CX6g044056 | 6:17,195,538-17,195,981 | + | C1H2g01415 | C2H2g23473 | LOC_Os06g33880 | Os06g0529900 | - | Detail |
| CX6g045101 | 6:17,210,333-17,212,693 | + | C1H6g04081 | C2H6g04846 | - | Os06g0530200 | - | Detail |
| CX6g041731 | 6:17,215,935-17,219,660 | + | C1H6g24681 | C2H6g19244 | LOC_Os06g33930 | Os06g0530300 | - | Detail |
| CX6g042715 | 6:17,223,971-17,225,733 | - | C1H6g26755 | C2H6g29241 | LOC_Os06g33940 | Os06g0530400 | - | Detail |
| CX6g045097 | 6:17,234,450-17,234,620 | - | - | - | - | - | - | Detail |
| CX6g044448 | 6:17,252,516-17,252,962 | + | C1H2g31562 | - | LOC_Os06g33970 | Os06g0530600 | - | Detail |