| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g29368 | 4:30,507,658-30,513,591 | + | C1H4g17177 | CX4g034793 | LOC_Os04g59320 | Os04g0689400 | - | Detail |
| C2H4g10646 | 4:30,514,406-30,515,925 | + | C1H4g15962 | CX4g031663 | LOC_Os04g59330 | Os04g0689500 | - | Detail |
| C2H4g21499 | 4:30,520,045-30,521,017 | + | C1H4g05384 | CX4g036307 | LOC_Os04g59340 | Os04g0689700 | - | Detail |
| C2H4g01472 | 4:30,523,602-30,524,699 | + | C1H4g05536 | CX4g034950 | LOC_Os04g59360 | Os04g0689800 | - | Detail |
| C2H4g12610 | 4:30,526,563-30,530,889 | + | C1H4g14916 | CX4g032101 | LOC_Os04g59360 | Os04g0689800 | - | Detail |
| C2H4g18186 | 4:30,541,288-30,542,675 | + | C1H4g15741 | CX4g031741 | LOC_Os04g59370 | Os04g0689900 | - | Detail |
| C2H4g13638 | 4:30,551,643-30,554,062 | + | C1H4g21540 | CX4g034943 | LOC_Os04g59380 | Os04g0690100 | - | Detail |
| C2H4g23794 | 4:30,561,339-30,567,049 | + | C1H4g10285 | CX4g032712 | LOC_Os04g59394 | Os04g0690300 | - | Detail |
| C2H4g10236 | 4:30,568,757-30,572,207 | + | C1H4g14673 | CX4g035891 | LOC_Os04g59400 | Os04g0690400 | - | Detail |
| C2H4g10344 | 4:30,578,674-30,579,488 | + | C1H4g07117 | CX4g034143 | LOC_Os04g59420 | Os04g0690500 | - | Detail |
| C2H4g01830 | 4:30,580,591-30,584,096 | - | C1H4g16012 | CX4g032346 | LOC_Os04g59430 | Os04g0690600 | - | Detail |
| C2H4g21324 | 4:30,589,590-30,590,357 | + | - | - | LOC_Os04g59440 | Os04g0690800 | PSBS2, PsbS, OsPsbS2, PSII-S | Detail |
| C2H4g11677 | 4:30,594,897-30,596,851 | + | C1H4g05861 | CX4g034110 | LOC_Os04g59450 | Os04g0691100 | SAPK5, OsSAPK5 | Detail |
| C2H4g24101 | 4:30,597,364-30,606,211 | - | C1H4g07779 | CX4g036214 | LOC_Os04g59460 | Os04g0691200 | - | Detail |
| C2H4g14210 | 4:30,611,359-30,612,219 | - | C1H4g13585 | CX4g036345 | LOC_Os04g59470 | Os04g0691300 | - | Detail |
| C2H4g07706 | 4:30,613,775-30,616,115 | + | C1H4g12409 | CX4g035525 | LOC_Os04g59480 | Os04g0691400 | - | Detail |
| C2H4g03071 | 4:30,621,244-30,633,385 | + | C1H4g07625 | CX4g032924 | LOC_Os04g59494 | Os04g0691500 | - | Detail |
| C2H4g15610 | 4:30,633,797-30,634,228 | + | C1H4g01268 | - | - | Os04g0691600 | - | Detail |
| C2H4g09678 | 4:30,636,339-30,645,952 | - | C1H4g29823 | CX4g035435 | LOC_Os04g59510 | Os04g0691700 | - | Detail |
| C2H4g25533 | 4:30,645,582-30,645,842 | + | C1H4g24974 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001799 | 1:25,127,301-25,130,335 | - | C1H1g29982 | C2H1g12213 | LOC_Os01g49120 | Os01g0684900 | - | Detail |
| CX1g003066 | 1:25,133,423-25,133,951 | + | C1H1g28582 | - | - | - | - | Detail |
| CX1g003730 | 1:25,134,266-25,138,917 | - | C1H1g11448 | C2H1g09209 | LOC_Os01g49150 | Os01g0685200 | - | Detail |
| CX1g007197 | 1:25,142,085-25,143,235 | + | C1H1g30171 | C2H1g29921 | LOC_Os01g49160 | Os01g0685400 | RGN1 | Detail |
| CX1g004222 | 1:25,153,722-25,164,871 | - | C1H1g13712 | C2H1g15034 | LOC_Os01g49180 | Os01g0685500 | - | Detail |
| CX1g004551 | 1:25,169,659-25,173,519 | + | C1H1g18062 | C2H1g05241 | LOC_Os01g49190 | Os01g0685800 | - | Detail |
| CX1g003807 | 1:25,175,352-25,179,240 | + | C1H1g18271 | C2H1g18560 | LOC_Os01g49200 | Os01g0685900 | - | Detail |
| CX1g000595 | 1:25,181,851-25,182,473 | + | C1H5g02955 | C2H5g20606 | LOC_Os01g49210 | Os01g0686000 | - | Detail |
| CX1g001701 | 1:25,184,996-25,185,145 | + | - | - | - | - | - | Detail |
| CX1g002173 | 1:25,189,052-25,190,419 | + | C1H1g07342 | C2H1g28047 | LOC_Os01g49230 | Os01g0686200 | - | Detail |
| CX1g002143 | 1:25,192,606-25,194,024 | + | C1H1g14493 | C2H1g26387 | LOC_Os01g49240 | Os01g0686300 | - | Detail |
| CX1g000503 | 1:25,197,509-25,202,536 | + | C1H1g17022 | C2H1g21728 | LOC_Os01g49250 | Os01g0686400 | - | Detail |
| CX1g000245 | 1:25,204,368-25,206,682 | + | C1H1g13243 | C2H1g16101 | LOC_Os01g49260 | Os01g0686500 | - | Detail |
| CX1g006990 | 1:25,207,006-25,207,488 | - | C1H1g28582 | C2H2g16287 | LOC_Os01g49450 | - | - | Detail |
| CX1g005008 | 1:25,210,088-25,212,409 | + | C1H1g17217 | C2H1g11919 | LOC_Os01g49270 | Os01g0686600 | - | Detail |
| CX1g006716 | 1:25,213,062-25,214,996 | - | C1H1g23518 | C2H1g06792 | LOC_Os01g49280 | Os01g0686700 | - | Detail |
| CX1g000667 | 1:25,219,547-25,221,562 | + | C1H1g28000 | C2H1g18988 | LOC_Os01g49290 | Os01g0686800 | - | Detail |
| CX1g003855 | 1:25,222,923-25,223,165 | + | - | - | LOC_Os05g48180 | - | - | Detail |
| CX1g006327 | 1:25,227,591-25,230,501 | + | C1H1g24973 | C2H1g26696 | LOC_Os01g49310 | Os01g0687300 | - | Detail |
| CX1g004166 | 1:25,235,171-25,236,106 | - | C1H1g17002 | C2H1g29685 | LOC_Os01g49320 | Os01g0687400 | - | Detail |