| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g29211 | 5:24,773,434-24,778,298 | - | C1H5g20997 | CX5g038490 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| C2H5g25800 | 5:24,781,493-24,782,926 | - | C1H5g28104 | CX5g040981 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| C2H5g28633 | 5:24,788,568-24,789,401 | - | C1H5g28669 | CX5g037849 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| C2H5g27012 | 5:24,791,474-24,795,427 | - | C1H5g07980 | CX5g040080 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| C2H5g24138 | 5:24,807,669-24,813,399 | - | C1H5g15566 | CX5g038359 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| C2H5g08909 | 5:24,821,276-24,829,119 | + | C1H5g26110 | CX5g041049 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| C2H5g25499 | 5:24,830,313-24,834,947 | - | C1H5g09316 | CX5g039720 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| C2H5g10034 | 5:24,834,804-24,835,256 | + | - | - | - | - | - | Detail |
| C2H5g15674 | 5:24,835,328-24,836,809 | + | C1H5g23946 | - | LOC_Os05g51650 | Os05g0594900 | - | Detail |
| C2H5g18619 | 5:24,837,143-24,837,715 | - | C1H5g07547 | CX5g039507 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| C2H5g04566 | 5:24,847,706-24,851,120 | + | C1H5g22966 | CX5g037190 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| C2H5g00689 | 5:24,855,205-24,879,340 | + | C1H5g29705 | CX5g037572 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| C2H5g03425 | 5:24,855,293-24,856,027 | - | C1H5g17200 | CX5g039657 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| C2H5g25216 | 5:24,879,621-24,882,457 | - | C1H5g10995 | CX5g038125 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| C2H5g14814 | 5:24,883,294-24,885,392 | - | C1H5g27674 | CX5g041076 | LOC_Os05g51710 | Os05g0595500 | - | Detail |
| C2H5g08054 | 5:24,889,439-24,889,771 | + | C1H6g06805 | CX5g039789 | - | Os05g0429100 | - | Detail |
| C2H5g23094 | 5:24,890,282-24,894,145 | - | C1H5g24835 | CX5g037161 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| C2H5g15029 | 5:24,896,984-24,897,528 | - | C1H5g11204 | CX5g037472 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C2H5g10878 | 5:24,898,710-24,900,326 | + | C1H5g19628 | CX5g037109 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| C2H5g03677 | 5:24,902,561-24,903,473 | - | C1H5g15344 | CX5g040213 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001799 | 1:25,127,301-25,130,335 | - | C1H1g29982 | C2H1g12213 | LOC_Os01g49120 | Os01g0684900 | - | Detail |
| CX1g003066 | 1:25,133,423-25,133,951 | + | C1H1g28582 | - | - | - | - | Detail |
| CX1g003730 | 1:25,134,266-25,138,917 | - | C1H1g11448 | C2H1g09209 | LOC_Os01g49150 | Os01g0685200 | - | Detail |
| CX1g007197 | 1:25,142,085-25,143,235 | + | C1H1g30171 | C2H1g29921 | LOC_Os01g49160 | Os01g0685400 | RGN1 | Detail |
| CX1g004222 | 1:25,153,722-25,164,871 | - | C1H1g13712 | C2H1g15034 | LOC_Os01g49180 | Os01g0685500 | - | Detail |
| CX1g004551 | 1:25,169,659-25,173,519 | + | C1H1g18062 | C2H1g05241 | LOC_Os01g49190 | Os01g0685800 | - | Detail |
| CX1g003807 | 1:25,175,352-25,179,240 | + | C1H1g18271 | C2H1g18560 | LOC_Os01g49200 | Os01g0685900 | - | Detail |
| CX1g000595 | 1:25,181,851-25,182,473 | + | C1H5g02955 | C2H5g20606 | LOC_Os01g49210 | Os01g0686000 | - | Detail |
| CX1g001701 | 1:25,184,996-25,185,145 | + | - | - | - | - | - | Detail |
| CX1g002173 | 1:25,189,052-25,190,419 | + | C1H1g07342 | C2H1g28047 | LOC_Os01g49230 | Os01g0686200 | - | Detail |
| CX1g002143 | 1:25,192,606-25,194,024 | + | C1H1g14493 | C2H1g26387 | LOC_Os01g49240 | Os01g0686300 | - | Detail |
| CX1g000503 | 1:25,197,509-25,202,536 | + | C1H1g17022 | C2H1g21728 | LOC_Os01g49250 | Os01g0686400 | - | Detail |
| CX1g000245 | 1:25,204,368-25,206,682 | + | C1H1g13243 | C2H1g16101 | LOC_Os01g49260 | Os01g0686500 | - | Detail |
| CX1g006990 | 1:25,207,006-25,207,488 | - | C1H1g28582 | C2H2g16287 | LOC_Os01g49450 | - | - | Detail |
| CX1g005008 | 1:25,210,088-25,212,409 | + | C1H1g17217 | C2H1g11919 | LOC_Os01g49270 | Os01g0686600 | - | Detail |
| CX1g006716 | 1:25,213,062-25,214,996 | - | C1H1g23518 | C2H1g06792 | LOC_Os01g49280 | Os01g0686700 | - | Detail |
| CX1g000667 | 1:25,219,547-25,221,562 | + | C1H1g28000 | C2H1g18988 | LOC_Os01g49290 | Os01g0686800 | - | Detail |
| CX1g003855 | 1:25,222,923-25,223,165 | + | - | - | LOC_Os05g48180 | - | - | Detail |
| CX1g006327 | 1:25,227,591-25,230,501 | + | C1H1g24973 | C2H1g26696 | LOC_Os01g49310 | Os01g0687300 | - | Detail |
| CX1g004166 | 1:25,235,171-25,236,106 | - | C1H1g17002 | C2H1g29685 | LOC_Os01g49320 | Os01g0687400 | - | Detail |