| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g03913 | 5:23,600,852-23,603,088 | + | C2H5g10460 | CX5g036982 | LOC_Os05g50220 | Os05g0578000 | - | Detail |
| C1H5g20150 | 5:23,607,102-23,608,025 | - | C2H5g03748 | CX5g037412 | LOC_Os05g50230 | Os05g0578100 | - | Detail |
| C1H5g22642 | 5:23,614,448-23,617,680 | + | C2H5g13618 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C1H5g05740 | 5:23,619,939-23,620,858 | + | C2H5g26536 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C1H5g30673 | 5:23,622,238-23,626,286 | - | C2H5g20774 | CX5g039590 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| C1H5g18644 | 5:23,628,267-23,629,130 | + | C2H5g01414 | CX5g038128 | - | - | - | Detail |
| C1H5g30824 | 5:23,638,998-23,639,922 | + | C2H5g24268 | CX5g037556 | LOC_Os05g50270 | Os05g0578900 | NL1, nl1, OsGATA15, SNFL1 | Detail |
| C1H5g28939 | 5:23,640,680-23,645,549 | - | C2H5g28493 | CX5g037802 | LOC_Os05g50280 | Os05g0579000 | OsERD5 | Detail |
| C1H5g17437 | 5:23,649,126-23,650,124 | + | C2H5g09709 | CX5g037992 | LOC_Os05g50290 | Os05g0579100 | - | Detail |
| C1H5g00625 | 5:23,652,781-23,654,715 | + | C2H5g24355 | CX5g039421 | LOC_Os05g50300 | Os05g0579200 | - | Detail |
| C1H5g28773 | 5:23,659,950-23,660,675 | + | C2H5g30078 | CX5g038909 | LOC_Os05g50310 | Os05g0579300 | - | Detail |
| C1H5g25217 | 5:23,672,989-23,673,594 | - | C2H5g16972 | CX5g037463 | LOC_Os05g50340 | Os05g0579600 | - | Detail |
| C1H5g24861 | 5:23,677,756-23,678,150 | - | C2H5g06063 | CX5g040775 | LOC_Os05g50350 | Os05g0579700 | - | Detail |
| C1H5g08314 | 5:23,684,030-23,686,749 | + | C2H5g20886 | CX5g040870 | LOC_Os05g50360 | Os05g0579800 | - | Detail |
| C1H5g24542 | 5:23,694,433-23,701,629 | + | C2H5g02301 | CX5g038555 | LOC_Os05g50370 | Os05g0579900 | - | Detail |
| C1H5g04263 | 5:23,702,286-23,707,469 | - | C2H5g26213 | CX5g040137 | LOC_Os05g50380 | Os05g0580000 | OsAGPL1, OsAPL3 | Detail |
| C1H5g02145 | 5:23,717,421-23,721,366 | + | C2H5g13644 | CX5g037650 | LOC_Os05g50410 | - | - | Detail |
| C1H5g24080 | 5:23,724,763-23,726,820 | + | C2H5g28264 | CX5g040658 | LOC_Os05g50460 | Os05g0581300 | - | Detail |
| C1H5g06864 | 5:23,737,397-23,738,215 | + | C2H5g17272 | CX5g037923 | LOC_Os05g50470 | Os05g0581700 | - | Detail |
| C1H5g11608 | 5:23,743,056-23,751,412 | + | C2H5g15909 | CX5g037805 | LOC_Os05g50480 | Os05g0581800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001799 | 1:25,127,301-25,130,335 | - | C1H1g29982 | C2H1g12213 | LOC_Os01g49120 | Os01g0684900 | - | Detail |
| CX1g003066 | 1:25,133,423-25,133,951 | + | C1H1g28582 | - | - | - | - | Detail |
| CX1g003730 | 1:25,134,266-25,138,917 | - | C1H1g11448 | C2H1g09209 | LOC_Os01g49150 | Os01g0685200 | - | Detail |
| CX1g007197 | 1:25,142,085-25,143,235 | + | C1H1g30171 | C2H1g29921 | LOC_Os01g49160 | Os01g0685400 | RGN1 | Detail |
| CX1g004222 | 1:25,153,722-25,164,871 | - | C1H1g13712 | C2H1g15034 | LOC_Os01g49180 | Os01g0685500 | - | Detail |
| CX1g004551 | 1:25,169,659-25,173,519 | + | C1H1g18062 | C2H1g05241 | LOC_Os01g49190 | Os01g0685800 | - | Detail |
| CX1g003807 | 1:25,175,352-25,179,240 | + | C1H1g18271 | C2H1g18560 | LOC_Os01g49200 | Os01g0685900 | - | Detail |
| CX1g000595 | 1:25,181,851-25,182,473 | + | C1H5g02955 | C2H5g20606 | LOC_Os01g49210 | Os01g0686000 | - | Detail |
| CX1g001701 | 1:25,184,996-25,185,145 | + | - | - | - | - | - | Detail |
| CX1g002173 | 1:25,189,052-25,190,419 | + | C1H1g07342 | C2H1g28047 | LOC_Os01g49230 | Os01g0686200 | - | Detail |
| CX1g002143 | 1:25,192,606-25,194,024 | + | C1H1g14493 | C2H1g26387 | LOC_Os01g49240 | Os01g0686300 | - | Detail |
| CX1g000503 | 1:25,197,509-25,202,536 | + | C1H1g17022 | C2H1g21728 | LOC_Os01g49250 | Os01g0686400 | - | Detail |
| CX1g000245 | 1:25,204,368-25,206,682 | + | C1H1g13243 | C2H1g16101 | LOC_Os01g49260 | Os01g0686500 | - | Detail |
| CX1g006990 | 1:25,207,006-25,207,488 | - | C1H1g28582 | C2H2g16287 | LOC_Os01g49450 | - | - | Detail |
| CX1g005008 | 1:25,210,088-25,212,409 | + | C1H1g17217 | C2H1g11919 | LOC_Os01g49270 | Os01g0686600 | - | Detail |
| CX1g006716 | 1:25,213,062-25,214,996 | - | C1H1g23518 | C2H1g06792 | LOC_Os01g49280 | Os01g0686700 | - | Detail |
| CX1g000667 | 1:25,219,547-25,221,562 | + | C1H1g28000 | C2H1g18988 | LOC_Os01g49290 | Os01g0686800 | - | Detail |
| CX1g003855 | 1:25,222,923-25,223,165 | + | - | - | LOC_Os05g48180 | - | - | Detail |
| CX1g006327 | 1:25,227,591-25,230,501 | + | C1H1g24973 | C2H1g26696 | LOC_Os01g49310 | Os01g0687300 | - | Detail |
| CX1g004166 | 1:25,235,171-25,236,106 | - | C1H1g17002 | C2H1g29685 | LOC_Os01g49320 | Os01g0687400 | - | Detail |