| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g29234 | 3:9,589,591-9,592,789 | + | C1H3g09918 | CX3g029447 | LOC_Os03g19300 | Os03g0305700 | - | Detail |
| C2H3g25404 | 3:9,593,061-9,594,512 | - | C1H3g15276 | CX3g025751 | LOC_Os03g19310 | Os03g0305800 | - | Detail |
| C2H3g04492 | 3:9,605,909-9,607,258 | + | C1H3g04998 | CX3g029664 | LOC_Os03g19330 | Os03g0306100 | - | Detail |
| C2H3g27650 | 3:9,608,099-9,625,295 | - | C1H3g22410 | CX3g028723 | LOC_Os03g19340 | Os03g0306200 | - | Detail |
| C2H3g07435 | 3:9,627,515-9,639,295 | - | C1H3g02755 | CX3g027549 | LOC_Os03g19350 | Os03g0306400 | - | Detail |
| C2H3g20582 | 3:9,647,619-9,648,140 | + | C1H3g18574 | CX3g026074 | LOC_Os03g19375 | Os03g0239400 | - | Detail |
| C2H3g07871 | 3:9,651,461-9,651,847 | + | C1H3g08148 | CX3g027392 | LOC_Os03g19380 | Os03g0306800 | - | Detail |
| C2H3g26352 | 3:9,652,500-9,654,378 | - | C1H3g23949 | CX3g025960 | LOC_Os03g19390 | Os03g0306900 | - | Detail |
| C2H3g08753 | 3:9,654,788-9,656,681 | + | C1H3g18672 | CX3g025770 | LOC_Os03g19400 | Os03g0307000 | - | Detail |
| C2H3g28158 | 3:9,658,647-9,666,875 | + | C1H3g26919 | CX3g025641 | LOC_Os03g19410 | Os03g0307100 | - | Detail |
| C2H3g27859 | 3:9,667,653-9,668,684 | + | C1H3g07326 | CX3g028955 | LOC_Os03g19427 | Os03g0307300 | - | Detail |
| C2H3g23633 | 3:9,672,964-9,675,855 | - | C1H3g08713 | CX3g027893 | LOC_Os03g19420 | Os03g0307200 | NAS2, OsNAS2 | Detail |
| C2H3g12347 | 3:9,680,537-9,681,031 | + | C1H3g12875 | CX3g027748 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C2H3g00214 | 3:9,683,277-9,684,485 | + | C1H3g10945 | CX3g025182 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C2H3g27228 | 3:9,684,900-9,688,173 | + | C1H3g01117 | CX3g028724 | LOC_Os03g19462 | - | - | Detail |
| C2H3g27622 | 3:9,690,908-9,693,250 | + | C1H3g07984 | CX3g026010 | LOC_Os03g19470 | Os03g0307700 | - | Detail |
| C2H3g03655 | 3:9,693,645-9,700,852 | - | C1H3g00240 | CX3g031316 | LOC_Os03g19480 | Os03g0307800 | IEZ1, OsiEZ1, OsSET1, SET1, iEZ1, OsEZ1/OsiEZ1, OsEZ1, EZ1, ez1, OsSET15, SDG718 | Detail |
| C2H3g06844 | 3:9,702,422-9,702,951 | + | C1H3g04726 | CX3g025615 | LOC_Os03g13830 | Os03g0307900 | - | Detail |
| C2H3g23976 | 3:9,704,003-9,706,653 | + | C1H3g19730 | CX3g024948 | LOC_Os03g19500 | Os03g0308000 | SMG3 | Detail |
| C2H3g08220 | 3:9,708,308-9,710,749 | - | C1H3g14154 | CX3g029346 | LOC_Os03g19510 | Os03g0308100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044284 | 6:15,923,913-15,924,206 | + | - | - | - | - | - | Detail |
| CX6g043339 | 6:15,931,431-15,932,057 | - | C1H8g13175 | C2H4g04279 | LOC_Os05g14440 | - | - | Detail |
| CX6g042004 | 6:15,938,596-15,938,862 | + | - | - | - | - | - | Detail |
| CX6g045798 | 6:15,943,367-15,943,840 | - | C1H6g24227 | C2H6g26041 | LOC_Os06g30810 | Os06g0504100 | - | Detail |
| CX6g043950 | 6:15,950,272-15,961,953 | - | C1H6g22494 | C2H6g03410 | LOC_Os06g22550 | Os06g0331300 | - | Detail |
| CX6g043844 | 6:15,980,857-15,981,471 | - | C1H6g24227 | C2H6g26041 | LOC_Os06g30810 | Os06g0504100 | - | Detail |
| CX6g044833 | 6:15,990,073-15,990,462 | - | - | - | - | - | - | Detail |
| CX6g043057 | 6:15,993,382-15,994,248 | - | - | - | - | - | - | Detail |
| CX6g042702 | 6:16,002,725-16,002,904 | + | - | - | - | - | - | Detail |
| CX6g043187 | 6:16,011,160-16,012,335 | - | C1H6g19092 | C2H6g10065 | LOC_Os06g30860 | Os06g0504900 | OsWRKYq6, OsWRKY31 | Detail |
| CX6g044225 | 6:16,031,141-16,031,329 | + | - | - | - | - | - | Detail |
| CX6g044956 | 6:16,043,710-16,075,973 | - | C1H6g28196 | C2H6g01043 | LOC_Os06g30894 | Os06g0505100 | - | Detail |
| CX6g041832 | 6:16,055,600-16,055,800 | + | - | - | - | - | - | Detail |
| CX6g042361 | 6:16,079,766-16,083,930 | + | C1H6g25110 | C2H6g09051 | LOC_Os06g30910 | Os06g0505400 | - | Detail |
| CX6g043862 | 6:16,087,710-16,090,364 | + | C1H6g24962 | C2H6g22604 | - | Os06g0505700 | - | Detail |
| CX6g045779 | 6:16,119,782-16,121,879 | + | C1H6g31826 | C2H6g18363 | LOC_Os06g30930 | Os06g0506000 | - | Detail |
| CX6g041289 | 6:16,124,206-16,126,506 | + | C1H6g00503 | C2H6g23025 | LOC_Os06g30940 | Os06g0506100 | - | Detail |
| CX6g043948 | 6:16,129,390-16,133,007 | - | C1H6g18166 | C2H6g28879 | LOC_Os06g30950 | Os06g0506200 | - | Detail |
| CX6g043814 | 6:16,142,651-16,144,685 | - | C1H6g24322 | C2H6g30190 | LOC_Os06g30970 | Os06g0506600 | - | Detail |
| CX6g045674 | 6:16,162,081-16,162,530 | - | - | - | LOC_Os06g31070 | Os06g0507100 | - | Detail |