| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g08229 | 5:6,918,595-6,922,251 | - | C2H5g25628 | CX5g037652 | - | Os05g0237200 | - | Detail |
| C1H5g23690 | 5:6,924,798-6,927,300 | + | C2H5g10534 | CX5g038998 | LOC_Os05g14750 | Os05g0237400 | OsAGC12 | Detail |
| C1H5g10091 | 5:6,957,418-6,958,414 | - | C2H5g13111 | - | - | - | - | Detail |
| C1H5g07340 | 5:6,999,912-7,001,907 | - | C2H5g22509 | CX5g040601 | LOC_Os05g14820 | Os05g0237800 | OsLHT3 | Detail |
| C1H5g09636 | 5:7,013,535-7,019,663 | + | C2H5g00468 | CX5g037025 | LOC_Os05g14860 | Os05g0238200 | RIP2 | Detail |
| C1H5g11564 | 5:7,033,977-7,048,592 | + | C2H5g16898 | CX5g040390 | LOC_Os05g14930 | Os05g0239400 | - | Detail |
| C1H5g03622 | 5:7,049,320-7,051,488 | - | C2H5g30549 | CX5g040453 | LOC_Os05g14940 | Os05g0583100 | - | Detail |
| C1H5g11311 | 5:7,056,819-7,057,094 | + | C2H5g03459 | CX5g040189 | LOC_Os05g14960 | Os05g0239400 | - | Detail |
| C1H5g27252 | 5:7,062,597-7,065,076 | + | C2H5g29375 | CX5g039809 | LOC_Os05g14970 | Os05g0239400 | - | Detail |
| C1H5g11656 | 5:7,073,958-7,078,882 | - | C2H5g20099 | CX5g037057 | LOC_Os05g15140 | Os05g0241000 | - | Detail |
| C1H5g11532 | 5:7,091,780-7,100,716 | + | C2H5g10118 | CX5g038096 | LOC_Os05g15160 | Os05g0241200 | - | Detail |
| C1H5g03682 | 5:7,107,797-7,109,545 | - | C2H5g15366 | CX5g037086 | LOC_Os05g15180 | Os05g0241400 | - | Detail |
| C1H5g23227 | 5:7,148,353-7,151,570 | - | - | - | LOC_Os05g15280 | Os05g0242400 | - | Detail |
| C1H5g18349 | 5:7,158,656-7,160,985 | - | C2H5g11985 | CX5g037654 | LOC_Os05g15300 | Os05g0242600 | - | Detail |
| C1H5g21164 | 5:7,163,945-7,165,846 | - | - | - | - | - | - | Detail |
| C1H5g23617 | 5:7,179,996-7,180,233 | - | - | - | - | - | - | Detail |
| C1H5g21867 | 5:7,180,809-7,183,243 | - | C2H5g10393 | - | LOC_Os05g15370 | Os05g0243300 | - | Detail |
| C1H5g31263 | 5:7,184,293-7,184,722 | - | - | - | - | - | - | Detail |
| C1H5g28227 | 5:7,185,777-7,189,546 | - | C2H5g10393 | - | LOC_Os05g15370 | Os05g0243300 | - | Detail |
| C1H5g03556 | 5:7,191,476-7,192,242 | - | C2H5g15257 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043850 | 6:10,397,241-10,399,640 | + | C1H6g29858 | C2H6g20586 | LOC_Os06g21920 | Os06g0324800 | PT9, OsPT9, PHT1-9, OsPht1;9 | Detail |
| CX6g044784 | 6:10,410,904-10,413,403 | - | C1H6g29858 | C2H6g28781 | LOC_Os06g21950 | Os06g0325200 | PT10, OsPT10, PHT1-10, OsPht1;10 | Detail |
| CX6g041742 | 6:10,419,119-10,423,613 | + | C1H6g01775 | C2H6g27697 | LOC_Os06g21980 | Os06g0325500 | - | Detail |
| CX6g045683 | 6:10,437,104-10,438,108 | + | C1H6g07599 | C2H6g12814 | LOC_Os06g22020 | Os06g0325900 | - | Detail |
| CX6g044903 | 6:10,449,695-10,454,265 | - | C1H6g12794 | C2H6g27491 | LOC_Os06g22030 | Os06g0326000 | OsAHL12 | Detail |
| CX6g045572 | 6:10,480,662-10,480,868 | + | - | - | - | - | - | Detail |
| CX6g042848 | 6:10,498,524-10,504,217 | + | C1H6g13140 | C2H6g18434 | LOC_Os06g22060 | Os06g0326400 | OsPFP1α2 | Detail |
| CX6g043795 | 6:10,505,667-10,507,870 | + | C1H6g10998 | C2H6g17401 | LOC_Os06g22070 | Os06g0326500 | - | Detail |
| CX6g041382 | 6:10,514,033-10,516,306 | + | C1H6g11567 | C2H6g22880 | LOC_Os06g22080 | Os06g0326700 | - | Detail |
| CX6g043242 | 6:10,526,245-10,527,222 | + | C1H6g24038 | C2H6g13438 | LOC_Os06g22100 | Os06g0326900 | - | Detail |
| CX6g045374 | 6:10,551,512-10,551,685 | + | - | - | - | - | - | Detail |
| CX6g045562 | 6:10,551,945-10,555,836 | - | C1H6g20428 | C2H6g10187 | LOC_Os06g22140 | Os02g0713400 | OsNTRB | Detail |
| CX6g042440 | 6:10,567,307-10,567,966 | - | - | - | LOC_Os06g19880 | - | - | Detail |
| CX6g045217 | 6:10,573,531-10,574,052 | - | - | C2H6g08588 | LOC_Os06g22150 | Os06g0327400 | - | Detail |
| CX6g043389 | 6:10,614,762-10,617,299 | + | C1H6g18215 | C2H6g23875 | LOC_Os06g22290 | Os06g0328400 | - | Detail |
| CX6g043040 | 6:10,631,249-10,634,318 | + | C1H6g23568 | C2H6g15314 | LOC_Os06g22330 | Os06g0328800 | - | Detail |
| CX6g041178 | 6:10,635,772-10,637,278 | - | C1H6g00062 | C2H6g28071 | LOC_Os06g22340 | Os06g0328900 | - | Detail |
| CX6g043490 | 6:10,645,414-10,646,634 | + | - | - | LOC_Os06g21516 | Os06g0117800 | - | Detail |
| CX6g042392 | 6:10,650,534-10,652,813 | - | - | - | - | - | - | Detail |
| CX6g043454 | 6:10,676,141-10,676,629 | - | - | - | - | - | - | Detail |