| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g12635 | 3:8,903,785-8,904,729 | + | C2H3g05021 | CX3g029991 | LOC_Os03g18020 | Os03g0289400 | - | Detail |
| C1H3g24871 | 3:8,912,679-8,917,746 | - | C2H3g09473 | CX3g030981 | LOC_Os03g18030 | Os03g0289800 | OsLDOX2 | Detail |
| C1H3g18241 | 3:8,941,026-8,944,173 | - | C2H3g08584 | CX3g025852 | LOC_Os03g18070 | Os03g0290300 | OsFAD7 | Detail |
| C1H3g19780 | 3:8,949,336-8,950,648 | - | C2H3g10954 | - | - | Os03g0290400 | - | Detail |
| C1H3g18917 | 3:8,951,568-8,959,493 | - | C2H3g13012 | CX3g025324 | LOC_Os03g18080 | Os03g0290500 | - | Detail |
| C1H3g30153 | 3:8,964,775-8,966,604 | + | C2H3g23225 | CX3g026472 | LOC_Os03g18110 | Os03g0290900 | - | Detail |
| C1H3g18009 | 3:8,973,108-8,976,676 | + | C2H3g10304 | CX3g026408 | LOC_Os03g18120 | Os03g0291200 | - | Detail |
| C1H3g24409 | 3:8,976,594-8,980,598 | - | C2H3g15096 | CX3g030158 | LOC_Os03g18130 | Os03g0291500 | ASN1, OsASN1, OsAS1, AS1 | Detail |
| C1H3g22391 | 3:9,002,384-9,007,362 | + | C2H3g11917 | CX3g029744 | LOC_Os03g18140 | Os03g0291800 | - | Detail |
| C1H3g05911 | 3:9,018,999-9,020,467 | + | C2H3g26678 | CX3g026643 | LOC_Os03g18150 | Os03g0292100 | - | Detail |
| C1H3g07369 | 3:9,027,436-9,029,714 | + | C2H3g20112 | CX3g027477 | LOC_Os03g18160 | Os03g0292200 | - | Detail |
| C1H3g17889 | 3:9,040,291-9,041,667 | + | C2H3g05672 | CX3g030839 | LOC_Os03g18170 | Os03g0292700 | - | Detail |
| C1H3g01237 | 3:9,044,055-9,046,446 | - | C2H3g30223 | CX3g025459 | LOC_Os03g18180 | Os03g0292800 | - | Detail |
| C1H3g01195 | 3:9,047,325-9,048,090 | + | C2H3g08063 | CX3g030714 | - | - | - | Detail |
| C1H3g09425 | 3:9,049,716-9,060,032 | - | C2H3g00182 | CX3g026640 | LOC_Os03g18190 | Os03g0292900 | - | Detail |
| C1H3g30417 | 3:9,061,632-9,064,955 | + | C2H3g24196 | CX3g027666 | LOC_Os03g18200 | Os03g0293000 | - | Detail |
| C1H3g03996 | 3:9,066,108-9,066,376 | + | C2H3g19840 | - | LOC_Os03g18200 | - | - | Detail |
| C1H3g18813 | 3:9,066,577-9,067,266 | + | C2H3g19840 | CX3g029007 | - | Os03g0293100 | - | Detail |
| C1H3g03257 | 3:9,068,562-9,071,993 | + | C2H3g15900 | CX3g030471 | LOC_Os03g18210 | Os03g0293400 | - | Detail |
| C1H3g30760 | 3:9,073,173-9,076,083 | - | C2H3g03703 | CX3g027341 | LOC_Os03g18220 | Os03g0293500 | Ospdc2, PDC2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043850 | 6:10,397,241-10,399,640 | + | C1H6g29858 | C2H6g20586 | LOC_Os06g21920 | Os06g0324800 | PT9, OsPT9, PHT1-9, OsPht1;9 | Detail |
| CX6g044784 | 6:10,410,904-10,413,403 | - | C1H6g29858 | C2H6g28781 | LOC_Os06g21950 | Os06g0325200 | PT10, OsPT10, PHT1-10, OsPht1;10 | Detail |
| CX6g041742 | 6:10,419,119-10,423,613 | + | C1H6g01775 | C2H6g27697 | LOC_Os06g21980 | Os06g0325500 | - | Detail |
| CX6g045683 | 6:10,437,104-10,438,108 | + | C1H6g07599 | C2H6g12814 | LOC_Os06g22020 | Os06g0325900 | - | Detail |
| CX6g044903 | 6:10,449,695-10,454,265 | - | C1H6g12794 | C2H6g27491 | LOC_Os06g22030 | Os06g0326000 | OsAHL12 | Detail |
| CX6g045572 | 6:10,480,662-10,480,868 | + | - | - | - | - | - | Detail |
| CX6g042848 | 6:10,498,524-10,504,217 | + | C1H6g13140 | C2H6g18434 | LOC_Os06g22060 | Os06g0326400 | OsPFP1α2 | Detail |
| CX6g043795 | 6:10,505,667-10,507,870 | + | C1H6g10998 | C2H6g17401 | LOC_Os06g22070 | Os06g0326500 | - | Detail |
| CX6g041382 | 6:10,514,033-10,516,306 | + | C1H6g11567 | C2H6g22880 | LOC_Os06g22080 | Os06g0326700 | - | Detail |
| CX6g043242 | 6:10,526,245-10,527,222 | + | C1H6g24038 | C2H6g13438 | LOC_Os06g22100 | Os06g0326900 | - | Detail |
| CX6g045374 | 6:10,551,512-10,551,685 | + | - | - | - | - | - | Detail |
| CX6g045562 | 6:10,551,945-10,555,836 | - | C1H6g20428 | C2H6g10187 | LOC_Os06g22140 | Os02g0713400 | OsNTRB | Detail |
| CX6g042440 | 6:10,567,307-10,567,966 | - | - | - | LOC_Os06g19880 | - | - | Detail |
| CX6g045217 | 6:10,573,531-10,574,052 | - | - | C2H6g08588 | LOC_Os06g22150 | Os06g0327400 | - | Detail |
| CX6g043389 | 6:10,614,762-10,617,299 | + | C1H6g18215 | C2H6g23875 | LOC_Os06g22290 | Os06g0328400 | - | Detail |
| CX6g043040 | 6:10,631,249-10,634,318 | + | C1H6g23568 | C2H6g15314 | LOC_Os06g22330 | Os06g0328800 | - | Detail |
| CX6g041178 | 6:10,635,772-10,637,278 | - | C1H6g00062 | C2H6g28071 | LOC_Os06g22340 | Os06g0328900 | - | Detail |
| CX6g043490 | 6:10,645,414-10,646,634 | + | - | - | LOC_Os06g21516 | Os06g0117800 | - | Detail |
| CX6g042392 | 6:10,650,534-10,652,813 | - | - | - | - | - | - | Detail |
| CX6g043454 | 6:10,676,141-10,676,629 | - | - | - | - | - | - | Detail |