| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g09417 | 2:2,635,442-2,638,585 | - | C1H2g01047 | CX2g023705 | LOC_Os02g05950 | Os02g0153700 | LRK4 | Detail |
| C2H2g09853 | 2:2,639,040-2,640,513 | + | - | - | - | - | - | Detail |
| C2H2g08281 | 2:2,640,780-2,642,426 | - | C1H2g11501 | - | - | Os02g0828400 | - | Detail |
| C2H2g20625 | 2:2,643,135-2,646,876 | - | C1H2g12961 | CX2g023705 | LOC_Os02g05960 | Os02g0153900 | LRK3 | Detail |
| C2H2g22459 | 2:2,649,645-2,650,820 | + | - | - | - | - | - | Detail |
| C2H2g12173 | 2:2,650,638-2,653,778 | - | C1H2g06175 | CX2g023705 | LOC_Os02g05970 | Os02g0154000 | LRK2 | Detail |
| C2H2g06412 | 2:2,658,333-2,660,419 | + | C1H2g11020 | CX2g024231 | LOC_Os02g06010 | Os02g0154600 | - | Detail |
| C2H2g27089 | 2:2,667,990-2,670,149 | - | C1H2g22108 | CX2g019871 | LOC_Os02g06030 | Os02g0154800 | - | Detail |
| C2H2g26501 | 2:2,676,810-2,678,975 | - | C1H2g06108 | CX2g022545 | LOC_Os02g06070 | Os02g0154975 | - | Detail |
| C2H2g05238 | 2:2,684,887-2,685,572 | - | C1H2g18244 | - | - | Os02g0155300 | - | Detail |
| C2H2g27074 | 2:2,689,870-2,691,879 | - | C1H2g10335 | CX2g022043 | LOC_Os02g06120 | Os02g0155600 | - | Detail |
| C2H2g04574 | 2:2,693,449-2,695,636 | + | - | - | - | - | - | Detail |
| C2H2g18099 | 2:2,695,060-2,696,512 | - | C1H2g06175 | CX2g022043 | LOC_Os02g06120 | Os02g0154700 | - | Detail |
| C2H2g01336 | 2:2,700,456-2,702,336 | + | - | - | - | Os02g0153450 | - | Detail |
| C2H2g09791 | 2:2,701,167-2,703,341 | - | C1H2g23424 | CX2g022043 | LOC_Os02g06120 | Os02g0155750 | - | Detail |
| C2H2g30544 | 2:2,702,956-2,704,363 | + | C1H2g21825 | - | - | Os02g0155000 | - | Detail |
| C2H2g04531 | 2:2,707,543-2,709,360 | - | C1H2g04260 | CX2g023705 | LOC_Os02g06130 | Os02g0155700 | - | Detail |
| C2H2g20879 | 2:2,713,100-2,715,835 | + | C1H2g21825 | - | - | Os02g0156300 | - | Detail |
| C2H2g06146 | 2:2,713,511-2,715,840 | - | C1H2g21236 | CX2g022043 | LOC_Os02g06180 | Os02g0156200 | - | Detail |
| C2H2g28788 | 2:2,730,176-2,732,323 | - | C1H2g06175 | CX2g023705 | LOC_Os02g06250 | Os02g0157100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001755 | 1:24,781,791-24,784,523 | + | - | C2H1g00029 | LOC_Os01g48610 | Os01g0677900 | - | Detail |
| CX1g000852 | 1:24,787,440-24,790,142 | + | - | C2H1g18016 | LOC_Os01g48620 | Os01g0678000 | - | Detail |
| CX1g004827 | 1:24,794,878-24,797,787 | + | - | C2H1g00029 | LOC_Os01g48640 | Os01g0678100 | - | Detail |
| CX1g006166 | 1:24,803,199-24,806,003 | + | - | C2H1g26788 | LOC_Os01g48660 | Os01g0678400 | - | Detail |
| CX1g004904 | 1:24,807,743-24,821,542 | - | C1H1g22731 | C2H1g03816 | LOC_Os01g48680 | Os01g0678500 | TPC1, OsTPC1, Tpc1, OsCC1 | Detail |
| CX1g001832 | 1:24,822,634-24,824,489 | + | C1H1g06484 | C2H1g17432 | LOC_Os01g48690 | Os01g0678600 | - | Detail |
| CX1g005378 | 1:24,825,659-24,828,641 | - | C1H1g21202 | C2H1g29587 | LOC_Os01g48700 | Os01g0678700 | - | Detail |
| CX1g000800 | 1:24,833,603-24,834,194 | + | C1H1g29809 | C2H1g22453 | - | - | - | Detail |
| CX1g006182 | 1:24,836,901-24,837,533 | - | C1H1g09148 | C2H1g18621 | LOC_Os01g48710 | Os01g0678800 | - | Detail |
| CX1g003185 | 1:24,841,650-24,842,261 | - | - | - | - | - | - | Detail |
| CX1g006519 | 1:24,845,929-24,854,376 | + | C1H1g01369 | C2H1g02873 | LOC_Os01g48720 | Os01g0679000 | - | Detail |
| CX1g006874 | 1:24,860,977-24,861,255 | + | - | - | - | - | - | Detail |
| CX1g004313 | 1:24,863,787-24,867,829 | + | C1H1g09308 | C2H1g10975 | LOC_Os01g48750 | Os01g0679550 | - | Detail |
| CX1g003619 | 1:24,869,694-24,873,055 | + | C1H1g00895 | C2H1g25010 | LOC_Os01g48760 | Os01g0679600 | - | Detail |
| CX1g000487 | 1:24,873,848-24,876,098 | - | C1H5g03876 | C2H1g04367 | LOC_Os01g48770 | Os01g0679700 | - | Detail |
| CX1g003718 | 1:24,887,472-24,893,144 | + | C1H1g15404 | C2H1g01242 | LOC_Os01g48790 | Os01g0679900 | - | Detail |
| CX1g004327 | 1:24,904,616-24,905,776 | + | C1H1g14743 | C2H1g18628 | LOC_Os01g48800 | Os01g0680200 | OsPUP4, BG3/OsPUP4, BG3 | Detail |
| CX1g006918 | 1:24,918,072-24,919,988 | + | C1H1g08166 | C2H1g09841 | LOC_Os01g48810 | Os01g0680400 | - | Detail |
| CX1g002655 | 1:24,925,762-24,926,673 | + | C1H1g07424 | C2H1g14175 | LOC_Os01g48820 | Os01g0680600 | - | Detail |
| CX1g002522 | 1:24,934,891-24,939,487 | - | C1H1g15834 | C2H1g22016 | LOC_Os01g48830 | Os01g0680700 | - | Detail |