| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g11654 | 10:13,114,879-13,116,499 | + | C1H10g00510 | CX10g009272 | - | - | - | Detail |
| C2H10g12269 | 10:13,117,635-13,121,415 | - | C1H10g17624 | CX10g008935 | - | Os10g0443400 | - | Detail |
| C2H10g26840 | 10:13,145,675-13,150,144 | - | C1H10g25358 | CX10g009823 | LOC_Os10g27450 | Os10g0414500 | - | Detail |
| C2H10g04005 | 10:13,163,472-13,168,910 | + | C1H10g18881 | CX10g010197 | LOC_Os10g27470 | Os10g0414700 | - | Detail |
| C2H10g02776 | 10:13,170,131-13,172,026 | + | C1H10g14697 | CX10g010797 | LOC_Os10g27480 | Os10g0414800 | - | Detail |
| C2H10g19881 | 10:13,174,578-13,176,586 | + | C1H10g27415 | CX10g008868 | LOC_Os10g27980 | Os10g0415100 | - | Detail |
| C2H10g14281 | 10:13,177,114-13,179,483 | - | C1H10g25041 | CX3g026455 | LOC_Os10g27990 | Os10g0415200 | - | Detail |
| C2H10g10013 | 10:13,182,401-13,185,858 | - | C1H10g07354 | CX10g010626 | LOC_Os10g28000 | Os10g0415300 | OsGR3, GR3 | Detail |
| C2H10g03088 | 10:13,188,985-13,195,293 | - | C1H10g15509 | - | LOC_Os10g28009 | Os10g0415400 | - | Detail |
| C2H10g19568 | 10:13,196,025-13,196,513 | - | - | CX10g010709 | - | - | - | Detail |
| C2H10g24591 | 10:13,204,999-13,212,483 | + | C1H10g20762 | CX10g007781 | LOC_Os10g28020 | Os10g0415600 | - | Detail |
| C2H10g02555 | 10:13,212,933-13,218,362 | + | C1H10g27918 | CX10g010664 | LOC_Os10g28030 | Os10g0415800 | - | Detail |
| C2H10g25158 | 10:13,218,737-13,225,392 | - | C1H10g25203 | CX10g008566 | LOC_Os10g28040 | Os10g0415900 | OsHAG702, OsGCN5 | Detail |
| C2H10g30285 | 10:13,228,983-13,229,909 | + | - | CX10g009835 | LOC_Os10g28050 | Os10g0416100 | - | Detail |
| C2H10g20393 | 10:13,230,768-13,231,354 | - | C1H12g16817 | CX12g016578 | - | - | - | Detail |
| C2H10g03716 | 10:13,231,474-13,232,106 | - | - | - | - | - | - | Detail |
| C2H10g24253 | 10:13,235,869-13,241,411 | - | C1H10g18638 | CX10g010316 | LOC_Os10g28060 | Os10g0416200 | ONI2, OsCUT9 | Detail |
| C2H10g18093 | 10:13,270,040-13,270,900 | + | - | CX10g008523 | LOC_Os10g28080 | Os10g0416500 | Oschib1 | Detail |
| C2H10g18613 | 10:13,283,171-13,284,037 | + | - | CX10g009394 | LOC_Os10g28120 | Os10g0416800 | Oschib2 | Detail |
| C2H10g26487 | 10:13,289,977-13,290,321 | + | - | - | LOC_Os10g28160 | Os10g0417300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001755 | 1:24,781,791-24,784,523 | + | - | C2H1g00029 | LOC_Os01g48610 | Os01g0677900 | - | Detail |
| CX1g000852 | 1:24,787,440-24,790,142 | + | - | C2H1g18016 | LOC_Os01g48620 | Os01g0678000 | - | Detail |
| CX1g004827 | 1:24,794,878-24,797,787 | + | - | C2H1g00029 | LOC_Os01g48640 | Os01g0678100 | - | Detail |
| CX1g006166 | 1:24,803,199-24,806,003 | + | - | C2H1g26788 | LOC_Os01g48660 | Os01g0678400 | - | Detail |
| CX1g004904 | 1:24,807,743-24,821,542 | - | C1H1g22731 | C2H1g03816 | LOC_Os01g48680 | Os01g0678500 | TPC1, OsTPC1, Tpc1, OsCC1 | Detail |
| CX1g001832 | 1:24,822,634-24,824,489 | + | C1H1g06484 | C2H1g17432 | LOC_Os01g48690 | Os01g0678600 | - | Detail |
| CX1g005378 | 1:24,825,659-24,828,641 | - | C1H1g21202 | C2H1g29587 | LOC_Os01g48700 | Os01g0678700 | - | Detail |
| CX1g000800 | 1:24,833,603-24,834,194 | + | C1H1g29809 | C2H1g22453 | - | - | - | Detail |
| CX1g006182 | 1:24,836,901-24,837,533 | - | C1H1g09148 | C2H1g18621 | LOC_Os01g48710 | Os01g0678800 | - | Detail |
| CX1g003185 | 1:24,841,650-24,842,261 | - | - | - | - | - | - | Detail |
| CX1g006519 | 1:24,845,929-24,854,376 | + | C1H1g01369 | C2H1g02873 | LOC_Os01g48720 | Os01g0679000 | - | Detail |
| CX1g006874 | 1:24,860,977-24,861,255 | + | - | - | - | - | - | Detail |
| CX1g004313 | 1:24,863,787-24,867,829 | + | C1H1g09308 | C2H1g10975 | LOC_Os01g48750 | Os01g0679550 | - | Detail |
| CX1g003619 | 1:24,869,694-24,873,055 | + | C1H1g00895 | C2H1g25010 | LOC_Os01g48760 | Os01g0679600 | - | Detail |
| CX1g000487 | 1:24,873,848-24,876,098 | - | C1H5g03876 | C2H1g04367 | LOC_Os01g48770 | Os01g0679700 | - | Detail |
| CX1g003718 | 1:24,887,472-24,893,144 | + | C1H1g15404 | C2H1g01242 | LOC_Os01g48790 | Os01g0679900 | - | Detail |
| CX1g004327 | 1:24,904,616-24,905,776 | + | C1H1g14743 | C2H1g18628 | LOC_Os01g48800 | Os01g0680200 | OsPUP4, BG3/OsPUP4, BG3 | Detail |
| CX1g006918 | 1:24,918,072-24,919,988 | + | C1H1g08166 | C2H1g09841 | LOC_Os01g48810 | Os01g0680400 | - | Detail |
| CX1g002655 | 1:24,925,762-24,926,673 | + | C1H1g07424 | C2H1g14175 | LOC_Os01g48820 | Os01g0680600 | - | Detail |
| CX1g002522 | 1:24,934,891-24,939,487 | - | C1H1g15834 | C2H1g22016 | LOC_Os01g48830 | Os01g0680700 | - | Detail |