| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24923 | 1:13,798,897-13,806,357 | - | C2H1g04184 | CX1g006855 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| C1H1g25289 | 1:13,822,069-13,822,308 | + | C2H1g05311 | - | LOC_Os01g27070 | Os01g0368500 | - | Detail |
| C1H1g29900 | 1:13,822,688-13,824,024 | + | C2H1g05311 | CX1g000728 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| C1H1g21071 | 1:13,844,768-13,853,413 | - | C2H1g23898 | CX1g002302 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| C1H1g21722 | 1:13,861,346-13,866,738 | + | C2H1g08610 | CX1g007040 | LOC_Os01g27160 | Os01g0369200 | OsCUL1-3 | Detail |
| C1H1g09984 | 1:13,867,263-13,867,565 | - | C2H1g00961 | CX1g002985 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| C1H1g16578 | 1:13,867,587-13,871,948 | - | C2H1g00961 | CX1g002985 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| C1H1g21027 | 1:13,875,291-13,876,304 | + | C2H1g23105 | CX1g004644 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| C1H1g15878 | 1:13,876,388-13,877,154 | + | C2H1g15692 | - | - | - | - | Detail |
| C1H1g28118 | 1:13,880,041-13,880,500 | + | C2H1g16294 | CX1g005028 | - | - | - | Detail |
| C1H1g15388 | 1:13,884,773-13,886,360 | - | C2H1g16460 | CX1g002058 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| C1H1g02110 | 1:13,897,917-13,898,813 | + | C2H1g23105 | CX1g004644 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| C1H1g03904 | 1:13,904,189-13,905,750 | - | C2H1g16460 | CX1g005613 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| C1H1g06071 | 1:13,917,711-13,919,649 | - | C2H1g30124 | CX1g000151 | LOC_Os01g27230 | Os01g0370000 | - | Detail |
| C1H1g23256 | 1:13,920,819-13,921,385 | - | C2H1g30124 | CX1g005680 | LOC_Os01g27240 | Os01g0369900 | - | Detail |
| C1H1g03681 | 1:13,926,362-13,928,647 | - | C2H1g01507 | CX1g005680 | LOC_Os01g27240 | Os01g0370000 | - | Detail |
| C1H1g30782 | 1:13,947,447-13,948,595 | - | C2H1g22665 | CX1g001786 | LOC_Os01g27260 | Os01g0370200 | - | Detail |
| C1H1g22563 | 1:13,953,832-13,955,238 | + | C2H1g23519 | CX1g004528 | LOC_Os01g27300 | Os01g0370600 | - | Detail |
| C1H1g15771 | 1:13,968,971-13,970,431 | - | - | - | - | - | - | Detail |
| C1H1g11191 | 1:13,971,806-13,974,151 | - | C2H1g23519 | CX1g000438 | LOC_Os01g27360 | Os01g0371200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041954 | 6:9,838,751-9,839,742 | - | C1H6g28638 | C2H6g20819 | LOC_Os06g20790 | Os06g0313440 | - | Detail |
| CX6g042347 | 6:9,876,453-9,877,031 | - | C1H6g07131 | C2H6g04157 | LOC_Os06g20820 | - | - | Detail |
| CX6g045334 | 6:9,889,858-9,890,034 | - | - | - | - | Os02g0188201 | - | Detail |
| CX6g041754 | 6:9,912,165-9,914,923 | - | C1H6g06141 | C2H6g28978 | LOC_Os06g20860 | Os06g0314000 | - | Detail |
| CX6g042620 | 6:9,917,028-9,920,009 | - | - | C2H6g07747 | LOC_Os06g20870 | Os06g0314100 | - | Detail |
| CX6g043282 | 6:9,924,207-9,927,674 | - | - | C2H6g01193 | LOC_Os06g17950 | Os06g0314400 | - | Detail |
| CX6g043498 | 6:9,933,673-9,934,512 | - | - | C2H6g21475 | LOC_Os06g20900 | Os06g0314501 | - | Detail |
| CX6g045108 | 6:9,946,980-9,954,306 | - | C1H6g01173 | C2H6g00055 | LOC_Os06g20920 | Os06g0314600 | - | Detail |
| CX6g044074 | 6:9,974,503-9,974,667 | - | - | - | LOC_Os11g34930 | - | - | Detail |
| CX6g043063 | 6:9,979,256-9,982,048 | - | C1H6g02520 | C2H6g02777 | LOC_Os06g20960 | Os06g0315000 | - | Detail |
| CX6g042271 | 6:9,985,833-9,987,416 | + | C1H6g26290 | C2H6g11843 | LOC_Os06g21020 | Os06g0315300 | - | Detail |
| CX6g045559 | 6:10,013,191-10,013,460 | + | - | - | - | - | - | Detail |
| CX6g045452 | 6:10,013,587-10,013,844 | - | - | C2H6g24770 | - | Os06g0315601 | - | Detail |
| CX6g044712 | 6:10,017,476-10,018,238 | + | C1H6g06107 | C2H6g16311 | LOC_Os06g21099 | Os06g0315900 | - | Detail |
| CX6g045899 | 6:10,020,083-10,021,141 | + | C1H6g01754 | C2H6g17713 | - | - | - | Detail |
| CX6g041973 | 6:10,026,557-10,027,520 | + | C1H6g01617 | C2H6g17870 | LOC_Os06g21110 | Os06g0316000 | Os2H16 | Detail |
| CX6g044240 | 6:10,028,922-10,031,421 | + | C1H6g16954 | C2H6g22107 | LOC_Os06g21120 | Os06g0316100 | - | Detail |
| CX6g044894 | 6:10,057,088-10,057,844 | - | C1H6g09647 | C2H6g26644 | LOC_Os06g21210 | Os06g0316800 | - | Detail |
| CX6g042665 | 6:10,101,001-10,101,912 | - | C1H6g25626 | C2H6g29048 | LOC_Os05g04390 | - | - | Detail |
| CX6g045107 | 6:10,102,538-10,103,083 | - | - | C2H6g09461 | - | - | - | Detail |