| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g04890 | 9:19,069,124-19,073,047 | + | C2H9g17992 | CX9g056849 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| C1H9g13266 | 9:19,073,094-19,076,233 | + | C2H9g25680 | CX9g058049 | LOC_Os09g39390 | Os09g0567366 | - | Detail |
| C1H9g16090 | 9:19,078,531-19,081,006 | + | C2H9g00653 | CX9g056022 | LOC_Os09g39400 | Os09g0567400 | - | Detail |
| C1H9g25909 | 9:19,085,026-19,090,786 | + | C2H9g10548 | CX9g057497 | LOC_Os09g39410 | Os09g0567500 | - | Detail |
| C1H9g01897 | 9:19,091,906-19,096,902 | + | C2H9g15634 | CX9g055257 | LOC_Os09g39420 | Os09g0567700 | - | Detail |
| C1H9g27590 | 9:19,096,960-19,100,398 | - | C2H9g07527 | CX9g058075 | LOC_Os09g39430 | Os09g0567800 | - | Detail |
| C1H9g04610 | 9:19,103,896-19,106,558 | - | C2H9g28844 | CX9g058045 | LOC_Os09g39440 | Os09g0567900 | - | Detail |
| C1H9g06631 | 9:19,108,871-19,113,014 | + | C2H9g14034 | CX9g055030 | LOC_Os09g39462 | Os09g0568000 | - | Detail |
| C1H9g15019 | 9:19,113,667-19,113,891 | + | - | CX9g058185 | - | - | - | Detail |
| C1H9g18800 | 9:19,114,406-19,115,801 | + | C2H9g07303 | CX9g055723 | LOC_Os09g39474 | Os09g0568100 | - | Detail |
| C1H9g25533 | 9:19,116,932-19,117,909 | - | C2H9g14146 | CX9g055477 | LOC_Os09g39490 | Os09g0568200 | - | Detail |
| C1H9g00933 | 9:19,121,436-19,122,161 | - | - | CX9g056373 | LOC_Os09g39510 | Os09g0568500 | - | Detail |
| C1H9g05388 | 9:19,125,266-19,125,907 | - | - | CX9g056956 | LOC_Os09g39520 | Os09g0568600 | - | Detail |
| C1H9g08565 | 9:19,127,695-19,128,339 | - | - | CX9g057185 | LOC_Os09g39530 | Os09g0568700 | - | Detail |
| C1H9g27100 | 9:19,129,439-19,130,916 | - | C2H9g28333 | CX9g057377 | LOC_Os09g39540 | Os09g0568800 | - | Detail |
| C1H9g30656 | 9:19,131,188-19,133,085 | + | C2H9g03364 | CX9g055404 | LOC_Os09g39550 | Os09g0568900 | IF1-2, IF<sub>1</sub>-2 | Detail |
| C1H9g22287 | 9:19,134,907-19,136,848 | + | C2H9g03868 | CX9g057720 | LOC_Os09g39560 | Os09g0569100 | - | Detail |
| C1H9g23985 | 9:19,140,226-19,140,612 | + | C2H9g00291 | CX9g057873 | - | - | - | Detail |
| C1H9g14979 | 9:19,141,650-19,145,064 | + | C2H9g00291 | CX9g057873 | LOC_Os09g39570 | Os09g0569200 | - | Detail |
| C1H9g21337 | 9:19,145,011-19,148,481 | - | C2H9g21708 | CX9g056948 | LOC_Os09g39580 | Os09g0569300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041273 | 6:9,607,089-9,607,313 | + | - | - | LOC_Os11g36005 | Os11g0567900 | - | Detail |
| CX6g044424 | 6:9,621,290-9,621,571 | - | - | - | LOC_Os06g20260 | - | - | Detail |
| CX6g045188 | 6:9,644,882-9,645,262 | + | - | - | - | - | - | Detail |
| CX6g044269 | 6:9,660,895-9,669,398 | - | C1H6g13182 | C2H6g11447 | LOC_Os06g20310 | Os06g0307900 | - | Detail |
| CX6g045311 | 6:9,673,253-9,677,943 | + | C1H6g26940 | C2H6g01883 | LOC_Os06g20320 | Os06g0308000 | - | Detail |
| CX6g041682 | 6:9,682,071-9,685,223 | - | C1H6g28578 | C2H6g01288 | LOC_Os06g20340 | Os06g0308100 | OsIBR5 | Detail |
| CX6g041373 | 6:9,692,286-9,694,935 | + | C1H6g27488 | C2H6g19307 | LOC_Os06g20354 | Os06g0308200 | - | Detail |
| CX6g043534 | 6:9,696,265-9,699,406 | - | C1H6g25430 | C2H6g10392 | LOC_Os06g20370 | Os06g0308300 | - | Detail |
| CX6g041185 | 6:9,704,652-9,705,335 | - | - | - | - | - | - | Detail |
| CX6g043037 | 6:9,708,511-9,713,410 | + | C1H6g27634 | C2H6g14579 | LOC_Os06g20390 | Os06g0308800 | - | Detail |
| CX6g043173 | 6:9,716,586-9,719,142 | - | C1H6g05261 | C2H6g24732 | LOC_Os06g20400 | Os06g0308900 | - | Detail |
| CX6g045162 | 6:9,724,126-9,730,254 | - | C1H6g21034 | C2H6g20900 | LOC_Os06g20410 | Os06g0309000 | - | Detail |
| CX6g044704 | 6:9,733,139-9,736,778 | - | C1H6g07803 | C2H6g03740 | LOC_Os06g20430 | Os06g0309200 | - | Detail |
| CX6g045706 | 6:9,747,089-9,751,496 | - | C1H6g14945 | C2H6g16425 | LOC_Os06g20570 | Os06g0311000 | - | Detail |
| CX6g041843 | 6:9,756,926-9,760,086 | + | C1H6g20026 | C2H6g23118 | LOC_Os06g20610 | Os06g0311300 | - | Detail |
| CX6g041490 | 6:9,764,691-9,769,284 | + | C1H6g21322 | C2H6g07641 | LOC_Os06g20620 | Os06g0311600 | - | Detail |
| CX6g044543 | 6:9,775,875-9,776,860 | - | C1H6g27381 | C2H6g23703 | LOC_Os06g20630 | Os06g0311800 | - | Detail |
| CX6g043740 | 6:9,777,711-9,780,023 | - | C1H6g20620 | C2H6g30321 | LOC_Os06g20630 | Os06g0311800 | - | Detail |
| CX6g045968 | 6:9,820,564-9,821,909 | + | - | C2H6g22404 | - | Os06g0313000 | - | Detail |
| CX6g042338 | 6:9,825,533-9,828,039 | - | C1H6g27381 | C2H6g09107 | LOC_Os06g20770 | Os06g0313320 | - | Detail |