| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g14164 | 2:5,782,637-5,783,032 | + | C2H2g26545 | - | LOC_Os02g12080 | Os02g0212400 | - | Detail |
| C1H2g27179 | 2:5,787,743-5,788,699 | + | C2H2g14725 | - | LOC_Os02g12090 | Os02g0212500 | - | Detail |
| C1H2g04594 | 2:5,794,065-5,831,620 | + | C2H2g03339 | CX2g022712 | LOC_Os02g12130 | Os02g0212900 | - | Detail |
| C1H2g05649 | 2:5,842,054-5,842,442 | - | C2H2g10808 | CX2g023767 | LOC_Os02g12180 | Os02g0213100 | - | Detail |
| C1H2g18056 | 2:5,846,573-5,846,764 | - | C2H2g22801 | CX2g023767 | LOC_Os02g12180 | Os02g0213100 | - | Detail |
| C1H2g22306 | 2:5,854,350-5,856,901 | + | C2H2g11617 | CX2g023550 | LOC_Os02g12200 | Os02g0213450 | - | Detail |
| C1H2g07423 | 2:5,902,417-5,904,923 | + | - | - | - | - | - | Detail |
| C1H2g08196 | 2:5,911,663-5,913,573 | + | C2H2g28886 | CX2g020359 | LOC_Os01g14200 | - | - | Detail |
| C1H2g14961 | 2:5,926,838-5,927,174 | - | C2H2g28181 | CX2g018944 | LOC_Os02g12270 | - | - | Detail |
| C1H2g08256 | 2:5,928,764-5,929,142 | - | C2H2g29814 | CX2g023092 | LOC_Os02g12280 | Os02g0213100 | - | Detail |
| C1H2g02744 | 2:5,944,472-5,946,376 | + | C2H2g19870 | CX2g019911 | LOC_Os02g12290 | Os02g0214300 | TMS5, OsaTRZ1 | Detail |
| C1H2g12990 | 2:5,946,870-5,949,146 | - | C2H2g11573 | CX2g020072 | LOC_Os02g12300 | Os02g0214400 | OsPLL3 | Detail |
| C1H2g03216 | 2:5,951,243-5,951,482 | + | C2H2g11062 | CX2g024612 | LOC_Os02g12310 | Os02g0214500 | OsNAC23 | Detail |
| C1H2g08668 | 2:5,952,145-5,952,723 | + | C2H2g11062 | CX2g024612 | LOC_Os02g12310 | Os02g0214500 | OsNAC23 | Detail |
| C1H2g14409 | 2:5,956,777-5,964,671 | - | C2H2g19304 | CX2g022032 | LOC_Os02g12380 | Os02g0214900 | - | Detail |
| C1H2g22759 | 2:5,967,712-5,977,088 | - | C2H2g23277 | CX2g021296 | LOC_Os02g12360 | Os02g0215000 | - | Detail |
| C1H2g12661 | 2:5,983,082-5,988,030 | + | C2H2g16235 | CX2g023655 | LOC_Os02g12350 | Os02g0214900 | - | Detail |
| C1H2g20950 | 2:5,993,194-5,997,165 | + | C2H2g03672 | CX2g019777 | LOC_Os02g12400 | Os02g0215500 | - | Detail |
| C1H2g30669 | 2:6,000,421-6,004,410 | + | C2H2g02434 | CX2g021303 | LOC_Os02g12440 | Os02g0215900 | OsGIRL1 | Detail |
| C1H2g31159 | 2:6,005,759-6,009,518 | + | C2H2g25097 | CX2g020152 | LOC_Os02g12450 | Os02g0216000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041342 | 6:7,803,378-7,805,135 | + | C1H6g22454 | C2H6g29411 | LOC_Os06g16290 | Os06g0274200 | - | Detail |
| CX6g042085 | 6:7,823,132-7,830,303 | + | C1H6g11842 | C2H6g23301 | LOC_Os06g16330 | Os06g0274500 | OsSERL2 | Detail |
| CX6g044203 | 6:7,833,102-7,835,086 | - | C1H6g22322 | C2H6g18739 | LOC_Os06g16350 | Os06g0274800 | - | Detail |
| CX6g043973 | 6:7,840,607-7,842,424 | + | C1H6g28161 | C2H6g26801 | LOC_Os06g16370 | Os06g0275000 | SE1, Se1(Lm, Lf, Rs, Fl), se(t), Hd1, HD1, Fl, Lm, Se1, K, Rs, Lf, Se-1, Hd1(t), qHD1(t), OsA, OsBBX18, Hd1/OsA, OsCCT21 | Detail |
| CX6g041665 | 6:7,845,219-7,845,602 | + | - | - | - | - | - | Detail |
| CX6g042350 | 6:7,857,554-7,865,362 | + | C1H6g22180 | C2H6g04388 | LOC_Os06g16390 | Os06g0275500 | CLF, OsSET24, SDG711, EZ1, OsCLF | Detail |
| CX6g043166 | 6:7,868,655-7,870,836 | + | C1H6g11424 | C2H6g05369 | LOC_Os06g16400 | Os06g0275600 | - | Detail |
| CX6g045943 | 6:7,881,225-7,884,788 | - | C1H6g04853 | C2H6g15127 | LOC_Os06g16410 | Os06g0275700 | - | Detail |
| CX6g044817 | 6:7,887,818-7,887,979 | + | - | - | - | - | - | Detail |
| CX6g041884 | 6:7,888,155-7,888,385 | - | - | - | - | - | - | Detail |
| CX6g044340 | 6:7,905,397-7,907,689 | + | C1H6g01958 | C2H6g23432 | LOC_Os06g16420 | Os06g0275800 | - | Detail |
| CX6g045811 | 6:7,908,653-7,908,805 | - | - | - | - | - | - | Detail |
| CX6g045397 | 6:7,909,986-7,916,856 | + | C1H6g15789 | C2H6g19168 | LOC_Os06g16430 | Os06g0275900 | - | Detail |
| CX6g044986 | 6:7,935,067-7,937,614 | - | C1H6g25163 | C2H6g18561 | LOC_Os06g16480 | - | - | Detail |
| CX6g045758 | 6:7,964,267-7,964,419 | + | - | - | - | - | - | Detail |
| CX6g042029 | 6:7,977,761-7,981,733 | - | - | - | LOC_Os06g14970 | - | - | Detail |
| CX6g042709 | 6:8,019,554-8,019,706 | - | - | - | - | Os01g0728000 | - | Detail |
| CX6g044232 | 6:8,023,022-8,023,585 | + | - | C2H6g04931 | - | - | - | Detail |
| CX6g044034 | 6:8,027,041-8,027,232 | + | - | - | LOC_Os12g22920 | - | - | Detail |
| CX6g042959 | 6:8,030,761-8,033,339 | - | C1H6g04878 | C2H6g13388 | LOC_Os06g16640 | Os06g0278000 | - | Detail |