| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23743 | 1:5,305,835-5,306,335 | - | - | CX1g004127 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| C2H1g02275 | 1:5,314,040-5,318,157 | + | C1H1g15458 | - | - | Os01g0210750 | - | Detail |
| C2H1g05349 | 1:5,315,079-5,318,927 | - | C1H1g12886 | CX1g002610 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| C2H1g07302 | 1:5,324,139-5,328,648 | + | C1H1g30027 | CX1g004526 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| C2H1g29439 | 1:5,330,062-5,331,597 | - | C1H1g11954 | CX1g005082 | LOC_Os01g11270 | Os01g0210900 | - | Detail |
| C2H1g23127 | 1:5,353,535-5,355,070 | - | C1H1g11954 | CX1g000827 | LOC_Os01g11300 | Os01g0211200 | - | Detail |
| C2H1g26875 | 1:5,363,256-5,364,782 | - | C1H1g11954 | CX1g005082 | LOC_Os01g11340 | Os01g0211600 | - | Detail |
| C2H1g05400 | 1:5,376,702-5,378,036 | - | C1H1g07906 | - | LOC_Os01g11350 | Os01g0211800 | - | Detail |
| C2H1g30364 | 1:5,392,325-5,404,996 | + | C1H1g25024 | CX1g006413 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| C2H1g07400 | 1:5,413,173-5,418,384 | + | C1H1g24516 | CX1g004990 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| C2H1g07852 | 1:5,419,207-5,420,699 | - | C1H1g10197 | CX1g007192 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| C2H1g19820 | 1:5,428,807-5,429,451 | - | - | - | - | - | - | Detail |
| C2H1g19922 | 1:5,447,110-5,450,771 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11460 | Os01g0212700 | - | Detail |
| C2H1g21565 | 1:5,452,260-5,452,775 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11480 | Os01g0673900 | - | Detail |
| C2H1g00533 | 1:5,455,349-5,456,053 | - | C1H1g22295 | CX1g001182 | LOC_Os01g11490 | Os01g0213100 | - | Detail |
| C2H1g20430 | 1:5,459,163-5,459,843 | - | C1H1g24050 | CX1g001182 | LOC_Os01g11500 | Os01g0213100 | - | Detail |
| C2H1g03845 | 1:5,462,634-5,464,451 | + | - | CX1g000251 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| C2H1g20281 | 1:5,470,874-5,471,578 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| C2H1g27187 | 1:5,486,799-5,488,694 | - | C1H1g28036 | CX1g004394 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |
| C2H1g17634 | 1:5,519,687-5,522,015 | - | C1H1g17492 | CX1g003866 | LOC_Os01g11570 | Os01g0214200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002152 | 1:24,671,849-24,672,332 | - | - | - | - | - | - | Detail |
| CX1g004386 | 1:24,672,174-24,672,527 | + | - | - | - | - | - | Detail |
| CX1g004696 | 1:24,674,861-24,681,225 | + | C1H1g00871 | C2H1g18985 | LOC_Os01g48380 | Os01g0674700 | ASL3 | Detail |
| CX1g004277 | 1:24,683,155-24,689,243 | + | C1H1g21765 | C2H1g24321 | LOC_Os01g48390 | Os01g0674800 | - | Detail |
| CX1g003987 | 1:24,691,287-24,691,508 | - | C1H1g28582 | - | LOC_Os06g46720 | - | - | Detail |
| CX1g000551 | 1:24,692,575-24,694,878 | + | C1H1g11274 | C2H1g20771 | LOC_Os01g48410 | Os01g0675000 | OsRopGEF6 | Detail |
| CX1g000957 | 1:24,695,929-24,697,734 | - | C1H1g18154 | C2H1g09998 | LOC_Os01g48420 | Os01g0675100 | - | Detail |
| CX1g000359 | 1:24,699,846-24,700,955 | - | C1H1g15939 | C2H1g00882 | LOC_Os01g48430 | Os01g0675400 | - | Detail |
| CX1g002880 | 1:24,703,146-24,705,768 | - | C1H1g11012 | C2H1g29363 | LOC_Os01g48440 | Os01g0675500 | - | Detail |
| CX1g002244 | 1:24,718,399-24,720,193 | + | C1H1g25883 | C2H1g14959 | LOC_Os01g48444 | Os01g0675700 | - | Detail |
| CX1g002309 | 1:24,722,321-24,723,202 | - | C1H1g20685 | C2H1g30375 | LOC_Os01g48446 | Os01g0675800 | OsNAC14 | Detail |
| CX1g007109 | 1:24,727,933-24,728,220 | - | - | - | - | - | - | Detail |
| CX1g005765 | 1:24,729,377-24,730,105 | + | - | - | LOC_Os01g48500 | Os01g0676200 | - | Detail |
| CX1g003850 | 1:24,746,170-24,747,866 | + | C1H1g16861 | C2H1g06845 | LOC_Os01g48530 | Os01g0676900 | - | Detail |
| CX1g000037 | 1:24,752,867-24,754,937 | + | C1H1g30124 | C2H1g01752 | LOC_Os01g48540 | Os01g0677000 | - | Detail |
| CX1g004463 | 1:24,756,270-24,756,521 | - | - | - | - | Os01g0822501 | - | Detail |
| CX1g000106 | 1:24,760,549-24,761,091 | - | - | - | LOC_Os01g48550 | Os01g0677100 | - | Detail |
| CX1g000351 | 1:24,767,254-24,769,383 | + | C1H1g08755 | C2H1g01495 | LOC_Os01g48570 | Os11g0466300 | - | Detail |
| CX1g003581 | 1:24,772,657-24,776,911 | + | C1H1g10109 | C2H1g13965 | LOC_Os01g48580 | Os01g0677500 | - | Detail |
| CX1g005245 | 1:24,779,269-24,779,714 | - | C1H1g03120 | - | - | - | - | Detail |