| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g17513 | 6:18,950,278-18,952,306 | + | C1H6g14427 | CX6g044677 | LOC_Os06g36650 | Os06g0561800 | - | Detail |
| C2H6g27443 | 6:18,952,324-18,956,676 | + | C1H6g14427 | CX6g044677 | LOC_Os06g36650 | Os06g0561800 | - | Detail |
| C2H6g23248 | 6:18,968,683-18,978,117 | - | C1H6g08467 | CX6g044351 | LOC_Os06g36680 | Os06g0562300 | - | Detail |
| C2H6g17682 | 6:18,978,153-18,979,244 | - | C1H6g08467 | CX6g044351 | LOC_Os06g36680 | Os06g0562300 | - | Detail |
| C2H6g05710 | 6:19,005,067-19,009,563 | - | C1H6g19769 | CX6g042057 | LOC_Os06g36700 | Os06g0562600 | - | Detail |
| C2H6g21386 | 6:19,013,587-19,023,900 | - | C1H6g07141 | CX6g041706 | LOC_Os06g36710 | Os06g0562700 | - | Detail |
| C2H6g13390 | 6:19,028,996-19,033,559 | - | C1H6g04524 | CX6g043024 | LOC_Os06g36740 | Os06g0563000 | - | Detail |
| C2H6g09009 | 6:19,041,738-19,049,609 | + | C1H6g08741 | CX6g042579 | LOC_Os06g36770 | Os06g0563300 | - | Detail |
| C2H6g25367 | 6:19,073,369-19,080,637 | + | C1H6g07632 | CX6g043636 | LOC_Os06g36800 | Os06g0563900 | OsDGAT1-2 | Detail |
| C2H6g00215 | 6:19,091,962-19,093,606 | - | C1H6g20579 | CX6g042849 | LOC_Os06g36830 | Os06g0564400 | - | Detail |
| C2H6g00276 | 6:19,094,553-19,097,528 | - | C1H6g23075 | CX6g042849 | LOC_Os06g36840 | Os06g0564500 | - | Detail |
| C2H6g29498 | 6:19,119,941-19,122,700 | - | C1H6g20579 | CX6g042849 | LOC_Os06g36820 | Os06g0564700 | - | Detail |
| C2H6g24310 | 6:19,124,626-19,125,994 | - | C1H6g25657 | CX6g041590 | LOC_Os06g36890 | Os06g0564800 | - | Detail |
| C2H6g19648 | 6:19,126,431-19,128,671 | - | C1H6g25657 | CX6g041590 | LOC_Os06g36890 | Os03g0180700 | - | Detail |
| C2H6g11712 | 6:19,133,877-19,135,940 | + | C1H6g19779 | CX6g042099 | LOC_Os06g36910 | Os06g0565000 | - | Detail |
| C2H6g16057 | 6:19,139,139-19,142,094 | - | C1H6g21436 | CX6g045195 | LOC_Os06g36920 | Os06g0565100 | Os5100, CYP711A6 | Detail |
| C2H6g28646 | 6:19,144,786-19,145,906 | + | C1H6g20132 | CX6g044852 | LOC_Os06g36930 | Os06g0565200 | - | Detail |
| C2H6g27698 | 6:19,146,907-19,148,520 | - | C1H6g20943 | CX6g042845 | LOC_Os06g36940 | Os06g0565300 | - | Detail |
| C2H6g04325 | 6:19,156,054-19,160,594 | - | C1H6g23688 | - | - | - | - | Detail |
| C2H6g14787 | 6:19,169,355-19,175,968 | + | C1H6g07047 | CX6g045488 | LOC_Os06g36990 | Os06g0565900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044161 | 6:6,891,076-6,898,361 | + | C1H6g01800 | C2H6g26974 | LOC_Os06g14510 | Os06g0256500 | - | Detail |
| CX6g041641 | 6:6,914,340-6,915,126 | + | C1H6g09434 | C2H6g13880 | LOC_Os06g14530 | Os06g0256800 | - | Detail |
| CX6g042391 | 6:6,917,070-6,922,227 | - | C1H6g06821 | C2H6g23574 | LOC_Os06g14540 | Os06g0256900 | OsGH9B3 | Detail |
| CX6g045791 | 6:6,932,865-6,936,018 | - | C1H6g28420 | C2H6g22071 | LOC_Os06g14550 | Os06g0257200 | - | Detail |
| CX6g041399 | 6:6,941,937-6,942,956 | - | - | C2H6g03777 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| CX6g044724 | 6:6,945,675-6,947,222 | + | C1H6g02316 | C2H6g04113 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| CX6g043290 | 6:6,965,456-6,966,502 | + | C1H6g09969 | C2H6g00648 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| CX6g045414 | 6:6,977,018-6,977,545 | + | C1H6g21869 | C2H6g21355 | LOC_Os06g14700 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g042386 | 6:7,015,491-7,015,994 | + | C1H6g23895 | C2H6g21355 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g042613 | 6:7,019,900-7,020,406 | + | C1H6g23895 | C2H6g21355 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g045764 | 6:7,022,667-7,037,143 | + | C1H6g11559 | C2H6g03619 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| CX6g044644 | 6:7,038,859-7,046,231 | - | C1H6g18024 | C2H6g01049 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| CX6g041615 | 6:7,091,968-7,092,474 | - | C1H6g12074 | C2H6g10609 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| CX6g045748 | 6:7,101,589-7,102,095 | + | C1H6g12074 | C2H6g10609 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| CX6g042529 | 6:7,103,494-7,104,150 | + | - | C2H6g05565 | - | - | - | Detail |
| CX6g041426 | 6:7,118,508-7,118,726 | + | - | - | - | Os07g0464001 | - | Detail |
| CX6g041283 | 6:7,128,503-7,129,800 | - | C1H6g28805 | C2H6g15261 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| CX6g042162 | 6:7,156,538-7,158,317 | + | - | - | - | Os06g0260250 | - | Detail |
| CX6g045707 | 6:7,156,721-7,158,202 | - | - | C2H6g21532 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| CX6g041851 | 6:7,160,579-7,160,815 | - | - | - | - | - | - | Detail |