| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g26824 | 5:22,539,796-22,540,670 | + | C1H5g29960 | CX5g040694 | LOC_Os05g43240 | Os05g0541800 | - | Detail |
| C2H5g22825 | 5:22,541,243-22,542,775 | - | C1H5g10948 | CX5g039692 | LOC_Os05g46430 | Os05g0541900 | - | Detail |
| C2H5g27157 | 5:22,546,775-22,547,041 | - | C1H5g24953 | CX5g039049 | LOC_Os05g46440 | Os05g0542001 | - | Detail |
| C2H5g28898 | 5:22,547,597-22,550,385 | - | C1H5g29646 | CX5g040991 | LOC_Os05g46450 | Os05g0542100 | - | Detail |
| C2H5g10686 | 5:22,552,795-22,556,824 | - | C1H5g28336 | CX5g040398 | LOC_Os05g46460 | Os05g0542200 | - | Detail |
| C2H5g01306 | 5:22,562,391-22,563,212 | - | C1H5g22742 | - | LOC_Os05g46470 | Os05g0542300 | - | Detail |
| C2H5g20940 | 5:22,566,991-22,567,960 | + | C1H5g09305 | CX5g039111 | LOC_Os05g46480 | Os05g0542500 | OsLEA3-1 | Detail |
| C2H5g28006 | 5:22,570,469-22,575,907 | + | C1H5g16366 | CX5g038812 | LOC_Os05g46490 | Os05g0542600 | - | Detail |
| C2H5g00090 | 5:22,576,971-22,577,303 | + | C1H5g17509 | CX5g036843 | LOC_Os05g46500 | Os05g0542732 | - | Detail |
| C2H5g29209 | 5:22,579,557-22,582,434 | + | C1H5g04581 | CX5g038839 | LOC_Os05g46510 | Os05g0542800 | - | Detail |
| C2H5g29484 | 5:22,582,645-22,585,166 | + | C1H5g22788 | CX5g037613 | LOC_Os05g46520 | Os05g0542900 | - | Detail |
| C2H5g09269 | 5:22,587,092-22,588,125 | + | C1H5g21931 | CX5g040487 | LOC_Os05g46530 | Os05g0543000 | OSIPP3 | Detail |
| C2H5g29215 | 5:22,591,248-22,594,627 | - | C1H5g12205 | CX5g038871 | LOC_Os05g46550 | Os05g0543100 | - | Detail |
| C2H5g26031 | 5:22,595,364-22,598,453 | + | C1H5g11939 | CX5g038262 | LOC_Os05g46560 | Os05g0543200 | - | Detail |
| C2H5g16707 | 5:22,599,960-22,602,662 | + | C1H5g08116 | CX5g036803 | LOC_Os05g46570 | Os05g0543300 | - | Detail |
| C2H5g01982 | 5:22,603,608-22,606,845 | - | C1H5g14558 | CX5g038659 | LOC_Os05g46580 | Os05g0543400 | - | Detail |
| C2H5g14629 | 5:22,610,907-22,611,393 | + | C1H5g03603 | CX5g038075 | LOC_Os03g57910 | Os05g0123100 | OsGT43A | Detail |
| C2H5g18850 | 5:22,627,450-22,628,602 | + | C1H5g29668 | CX5g040628 | LOC_Os05g46610 | Os05g0543600 | RLM1 | Detail |
| C2H5g12435 | 5:22,631,435-22,634,863 | - | C1H5g30521 | CX5g039679 | LOC_Os05g46620 | Os05g0543700 | - | Detail |
| C2H5g01174 | 5:22,635,754-22,638,826 | - | C1H5g07279 | CX5g038009 | LOC_Os05g46630 | Os05g0543800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044161 | 6:6,891,076-6,898,361 | + | C1H6g01800 | C2H6g26974 | LOC_Os06g14510 | Os06g0256500 | - | Detail |
| CX6g041641 | 6:6,914,340-6,915,126 | + | C1H6g09434 | C2H6g13880 | LOC_Os06g14530 | Os06g0256800 | - | Detail |
| CX6g042391 | 6:6,917,070-6,922,227 | - | C1H6g06821 | C2H6g23574 | LOC_Os06g14540 | Os06g0256900 | OsGH9B3 | Detail |
| CX6g045791 | 6:6,932,865-6,936,018 | - | C1H6g28420 | C2H6g22071 | LOC_Os06g14550 | Os06g0257200 | - | Detail |
| CX6g041399 | 6:6,941,937-6,942,956 | - | - | C2H6g03777 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| CX6g044724 | 6:6,945,675-6,947,222 | + | C1H6g02316 | C2H6g04113 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| CX6g043290 | 6:6,965,456-6,966,502 | + | C1H6g09969 | C2H6g00648 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| CX6g045414 | 6:6,977,018-6,977,545 | + | C1H6g21869 | C2H6g21355 | LOC_Os06g14700 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g042386 | 6:7,015,491-7,015,994 | + | C1H6g23895 | C2H6g21355 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g042613 | 6:7,019,900-7,020,406 | + | C1H6g23895 | C2H6g21355 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g045764 | 6:7,022,667-7,037,143 | + | C1H6g11559 | C2H6g03619 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| CX6g044644 | 6:7,038,859-7,046,231 | - | C1H6g18024 | C2H6g01049 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| CX6g041615 | 6:7,091,968-7,092,474 | - | C1H6g12074 | C2H6g10609 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| CX6g045748 | 6:7,101,589-7,102,095 | + | C1H6g12074 | C2H6g10609 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| CX6g042529 | 6:7,103,494-7,104,150 | + | - | C2H6g05565 | - | - | - | Detail |
| CX6g041426 | 6:7,118,508-7,118,726 | + | - | - | - | Os07g0464001 | - | Detail |
| CX6g041283 | 6:7,128,503-7,129,800 | - | C1H6g28805 | C2H6g15261 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| CX6g042162 | 6:7,156,538-7,158,317 | + | - | - | - | Os06g0260250 | - | Detail |
| CX6g045707 | 6:7,156,721-7,158,202 | - | - | C2H6g21532 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| CX6g041851 | 6:7,160,579-7,160,815 | - | - | - | - | - | - | Detail |