| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g10352 | 2:19,343,513-19,347,044 | - | C2H2g12921 | CX2g021166 | LOC_Os02g33930 | Os02g0129000 | - | Detail |
| C1H2g27639 | 2:19,427,735-19,449,962 | + | C2H2g01626 | CX2g024825 | LOC_Os03g64290 | Os02g0545000 | - | Detail |
| C1H2g31615 | 2:19,489,308-19,489,646 | + | C2H2g18126 | CX2g023067 | - | - | - | Detail |
| C1H2g09850 | 2:19,491,742-19,495,080 | + | - | - | - | - | - | Detail |
| C1H2g27118 | 2:19,496,561-19,497,316 | - | C2H2g03353 | CX2g021266 | LOC_Os02g34260 | Os02g0546600 | - | Detail |
| C1H2g07807 | 2:19,525,033-19,527,471 | + | C2H2g28913 | CX2g021833 | LOC_Os02g34320 | Os02g0548100 | - | Detail |
| C1H2g25374 | 2:19,538,380-19,540,898 | + | C2H2g23048 | CX2g022612 | LOC_Os02g34370 | Os02g0548100 | - | Detail |
| C1H2g22824 | 2:19,541,937-19,542,668 | + | C2H2g01870 | CX2g024786 | - | - | - | Detail |
| C1H2g28412 | 2:19,584,781-19,591,765 | + | C2H2g19137 | CX2g021164 | LOC_Os02g48450 | Os02g0469600 | OsACP1 | Detail |
| C1H2g19067 | 2:19,597,640-19,601,165 | + | C2H2g11085 | CX2g022202 | LOC_Os02g34430 | Os02g0549200 | - | Detail |
| C1H2g22829 | 2:19,605,600-19,610,424 | - | C2H2g12630 | CX2g023303 | - | Os02g0549401 | - | Detail |
| C1H2g16065 | 2:19,612,897-19,619,677 | + | C2H2g30100 | CX2g020503 | LOC_Os02g34460 | Os02g0549600 | - | Detail |
| C1H2g11806 | 2:19,631,360-19,632,886 | + | C2H2g10553 | CX2g020153 | LOC_Os02g34490 | Os02g0549900 | - | Detail |
| C1H2g24078 | 2:19,640,124-19,645,958 | + | C2H2g08024 | CX2g022074 | LOC_Os02g34500 | Os02g0550000 | DMD1 | Detail |
| C1H2g08678 | 2:19,647,058-19,648,851 | - | C2H2g03515 | CX2g020686 | LOC_Os02g34510 | Os02g0550100 | - | Detail |
| C1H2g14925 | 2:19,652,042-19,654,726 | + | C2H2g14993 | CX2g020472 | LOC_Os02g34530 | Os02g0550300 | - | Detail |
| C1H2g20025 | 2:19,657,679-19,661,656 | - | C2H2g20189 | CX2g022290 | LOC_Os02g34560 | Os02g0550600 | OsCYT-INV1, OsCyt-inv1 | Detail |
| C1H2g03053 | 2:19,667,960-19,671,304 | - | C2H2g13633 | CX2g023794 | LOC_Os02g34570 | Os02g0550700 | - | Detail |
| C1H2g28652 | 2:19,674,383-19,676,989 | + | C2H2g03451 | CX2g022967 | LOC_Os02g34580 | Os02g0550800 | - | Detail |
| C1H2g26960 | 2:19,677,899-19,680,922 | - | C2H2g01217 | CX2g020128 | LOC_Os02g34590 | Os02g0550900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044161 | 6:6,891,076-6,898,361 | + | C1H6g01800 | C2H6g26974 | LOC_Os06g14510 | Os06g0256500 | - | Detail |
| CX6g041641 | 6:6,914,340-6,915,126 | + | C1H6g09434 | C2H6g13880 | LOC_Os06g14530 | Os06g0256800 | - | Detail |
| CX6g042391 | 6:6,917,070-6,922,227 | - | C1H6g06821 | C2H6g23574 | LOC_Os06g14540 | Os06g0256900 | OsGH9B3 | Detail |
| CX6g045791 | 6:6,932,865-6,936,018 | - | C1H6g28420 | C2H6g22071 | LOC_Os06g14550 | Os06g0257200 | - | Detail |
| CX6g041399 | 6:6,941,937-6,942,956 | - | - | C2H6g03777 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| CX6g044724 | 6:6,945,675-6,947,222 | + | C1H6g02316 | C2H6g04113 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| CX6g043290 | 6:6,965,456-6,966,502 | + | C1H6g09969 | C2H6g00648 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| CX6g045414 | 6:6,977,018-6,977,545 | + | C1H6g21869 | C2H6g21355 | LOC_Os06g14700 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g042386 | 6:7,015,491-7,015,994 | + | C1H6g23895 | C2H6g21355 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g042613 | 6:7,019,900-7,020,406 | + | C1H6g23895 | C2H6g21355 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g045764 | 6:7,022,667-7,037,143 | + | C1H6g11559 | C2H6g03619 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| CX6g044644 | 6:7,038,859-7,046,231 | - | C1H6g18024 | C2H6g01049 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| CX6g041615 | 6:7,091,968-7,092,474 | - | C1H6g12074 | C2H6g10609 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| CX6g045748 | 6:7,101,589-7,102,095 | + | C1H6g12074 | C2H6g10609 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| CX6g042529 | 6:7,103,494-7,104,150 | + | - | C2H6g05565 | - | - | - | Detail |
| CX6g041426 | 6:7,118,508-7,118,726 | + | - | - | - | Os07g0464001 | - | Detail |
| CX6g041283 | 6:7,128,503-7,129,800 | - | C1H6g28805 | C2H6g15261 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| CX6g042162 | 6:7,156,538-7,158,317 | + | - | - | - | Os06g0260250 | - | Detail |
| CX6g045707 | 6:7,156,721-7,158,202 | - | - | C2H6g21532 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| CX6g041851 | 6:7,160,579-7,160,815 | - | - | - | - | - | - | Detail |