| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28427 | 9:10,505,034-10,508,163 | - | C2H9g01317 | CX9g057006 | LOC_Os09g20640 | Os09g0372800 | - | Detail |
| C1H9g09695 | 9:10,511,123-10,512,238 | - | C2H9g25268 | CX9g055773 | LOC_Os09g20650 | Os09g0372900 | - | Detail |
| C1H9g18641 | 9:10,517,220-10,519,289 | - | C2H9g13192 | CX9g055929 | LOC_Os09g20660 | Os09g0373000 | - | Detail |
| C1H9g22651 | 9:10,526,080-10,535,137 | + | C2H9g08105 | CX9g055437 | LOC_Os09g20684 | Os09g0374900 | - | Detail |
| C1H9g24076 | 9:10,540,556-10,547,193 | + | C2H9g25240 | CX9g055662 | LOC_Os09g20684 | Os09g0374900 | - | Detail |
| C1H9g07380 | 9:10,550,026-10,550,728 | - | C2H9g13213 | CX9g056940 | - | - | - | Detail |
| C1H9g01978 | 9:10,570,857-10,571,900 | - | C2H9g05799 | CX9g055547 | LOC_Os09g20740 | Os09g0471200 | - | Detail |
| C1H9g05244 | 9:10,576,183-10,577,440 | - | C2H9g15195 | CX9g055547 | LOC_Os09g20750 | Os09g0471200 | - | Detail |
| C1H9g03757 | 9:10,611,139-10,614,678 | + | C2H9g05168 | CX9g055647 | LOC_Os09g20810 | Os09g0374900 | - | Detail |
| C1H9g08490 | 9:10,615,491-10,619,873 | - | C2H9g15335 | CX9g057566 | LOC_Os09g20820 | Os09g0375000 | - | Detail |
| C1H9g24976 | 9:10,622,065-10,626,483 | - | C2H9g01813 | CX9g056686 | - | Os09g0375100 | OsHSBP1 | Detail |
| C1H9g30043 | 9:10,630,943-10,632,268 | + | C2H9g27674 | CX9g056671 | LOC_Os09g20850 | Os09g0375300 | - | Detail |
| C1H9g12932 | 9:10,636,354-10,637,064 | - | - | - | LOC_Os09g20860 | Os09g0375400 | - | Detail |
| C1H9g17021 | 9:10,640,342-10,640,698 | - | - | - | LOC_Os09g20870 | Os09g0375500 | - | Detail |
| C1H9g13452 | 9:10,642,034-10,645,757 | - | C2H9g06042 | CX9g056188 | LOC_Os09g20880 | Os09g0375600 | CSK1 | Detail |
| C1H9g23247 | 9:10,652,036-10,654,098 | + | C2H9g06978 | CX9g056282 | LOC_Os09g20900 | Os09g0375900 | - | Detail |
| C1H9g14764 | 9:10,655,194-10,660,487 | - | C2H9g12486 | CX9g057975 | LOC_Os09g20910 | - | - | Detail |
| C1H9g17073 | 9:10,661,161-10,662,818 | - | C2H9g01319 | CX9g057975 | LOC_Os09g20910 | Os09g0376000 | - | Detail |
| C1H9g16054 | 9:10,676,616-10,679,147 | + | C2H9g11359 | CX9g055108 | LOC_Os09g20930 | Os09g0376300 | - | Detail |
| C1H9g09975 | 9:10,683,527-10,683,805 | - | C2H8g15060 | CX9g056844 | LOC_Os09g20940 | Os09g0376400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044161 | 6:6,891,076-6,898,361 | + | C1H6g01800 | C2H6g26974 | LOC_Os06g14510 | Os06g0256500 | - | Detail |
| CX6g041641 | 6:6,914,340-6,915,126 | + | C1H6g09434 | C2H6g13880 | LOC_Os06g14530 | Os06g0256800 | - | Detail |
| CX6g042391 | 6:6,917,070-6,922,227 | - | C1H6g06821 | C2H6g23574 | LOC_Os06g14540 | Os06g0256900 | OsGH9B3 | Detail |
| CX6g045791 | 6:6,932,865-6,936,018 | - | C1H6g28420 | C2H6g22071 | LOC_Os06g14550 | Os06g0257200 | - | Detail |
| CX6g041399 | 6:6,941,937-6,942,956 | - | - | C2H6g03777 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| CX6g044724 | 6:6,945,675-6,947,222 | + | C1H6g02316 | C2H6g04113 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| CX6g043290 | 6:6,965,456-6,966,502 | + | C1H6g09969 | C2H6g00648 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| CX6g045414 | 6:6,977,018-6,977,545 | + | C1H6g21869 | C2H6g21355 | LOC_Os06g14700 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g042386 | 6:7,015,491-7,015,994 | + | C1H6g23895 | C2H6g21355 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g042613 | 6:7,019,900-7,020,406 | + | C1H6g23895 | C2H6g21355 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g045764 | 6:7,022,667-7,037,143 | + | C1H6g11559 | C2H6g03619 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| CX6g044644 | 6:7,038,859-7,046,231 | - | C1H6g18024 | C2H6g01049 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| CX6g041615 | 6:7,091,968-7,092,474 | - | C1H6g12074 | C2H6g10609 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| CX6g045748 | 6:7,101,589-7,102,095 | + | C1H6g12074 | C2H6g10609 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| CX6g042529 | 6:7,103,494-7,104,150 | + | - | C2H6g05565 | - | - | - | Detail |
| CX6g041426 | 6:7,118,508-7,118,726 | + | - | - | - | Os07g0464001 | - | Detail |
| CX6g041283 | 6:7,128,503-7,129,800 | - | C1H6g28805 | C2H6g15261 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| CX6g042162 | 6:7,156,538-7,158,317 | + | - | - | - | Os06g0260250 | - | Detail |
| CX6g045707 | 6:7,156,721-7,158,202 | - | - | C2H6g21532 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| CX6g041851 | 6:7,160,579-7,160,815 | - | - | - | - | - | - | Detail |