| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g12965 | 6:24,182,047-24,182,463 | - | C2H6g06613 | CX6g043496 | LOC_Os06g45950 | Os06g0671150 | - | Detail |
| C1H6g05593 | 6:24,195,543-24,198,818 | - | C2H6g23053 | CX6g043201 | LOC_Os06g45960 | Os06g0671300 | - | Detail |
| C1H6g13886 | 6:24,213,709-24,214,158 | + | C2H6g06613 | CX6g045889 | LOC_Os06g45970 | Os06g0671600 | - | Detail |
| C1H6g19408 | 6:24,218,975-24,226,634 | + | C2H6g22756 | CX6g041235 | LOC_Os06g45980 | Os06g0671700 | - | Detail |
| C1H6g17945 | 6:24,227,620-24,229,468 | + | C2H6g13643 | CX6g042168 | LOC_Os06g45990 | Os06g0671800 | OsSec14-18 | Detail |
| C1H6g20129 | 6:24,230,174-24,232,712 | - | C2H6g13523 | CX6g043235 | LOC_Os06g46000 | Os06g0671900 | - | Detail |
| C1H6g04835 | 6:24,256,370-24,257,188 | - | C2H6g03424 | CX6g042765 | LOC_Os06g46030 | Os06g0672400 | OsG1L2 | Detail |
| C1H6g03300 | 6:24,270,337-24,270,881 | - | - | - | - | - | - | Detail |
| C1H6g06589 | 6:24,274,689-24,275,003 | - | C2H6g07492 | CX6g042065 | - | Os06g0531000 | - | Detail |
| C1H6g00429 | 6:24,277,861-24,279,269 | - | C2H6g20505 | - | LOC_Os06g46120 | Os06g0673300 | - | Detail |
| C1H6g04560 | 6:24,279,912-24,281,438 | - | C2H6g16269 | CX6g044377 | LOC_Os06g46060 | Os06g0672700 | - | Detail |
| C1H6g09876 | 6:24,288,922-24,290,989 | - | C2H6g04402 | - | LOC_Os06g46065 | Os06g0672801 | - | Detail |
| C1H6g27031 | 6:24,306,103-24,308,411 | - | C2H6g20505 | CX6g044377 | LOC_Os06g46120 | Os06g0673300 | - | Detail |
| C1H6g15594 | 6:24,318,389-24,325,882 | - | - | - | - | - | - | Detail |
| C1H6g15821 | 6:24,332,761-24,333,111 | - | - | CX6g042451 | LOC_Os06g46140 | Os06g0673800 | - | Detail |
| C1H6g14950 | 6:24,337,188-24,339,185 | - | C2H6g03862 | CX6g044991 | - | Os06g0674000 | - | Detail |
| C1H6g06204 | 6:24,362,397-24,364,590 | - | C2H6g03862 | CX6g044991 | - | Os06g0674000 | - | Detail |
| C1H6g18354 | 6:24,387,346-24,388,516 | - | - | - | - | - | - | Detail |
| C1H6g03179 | 6:24,394,081-24,398,585 | + | C2H6g00947 | CX6g041920 | LOC_Os06g46240 | Os06g0674800 | - | Detail |
| C1H6g26263 | 6:24,404,228-24,405,469 | - | - | CX6g043181 | LOC_Os06g46250 | Os06g0675200 | LIN1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044161 | 6:6,891,076-6,898,361 | + | C1H6g01800 | C2H6g26974 | LOC_Os06g14510 | Os06g0256500 | - | Detail |
| CX6g041641 | 6:6,914,340-6,915,126 | + | C1H6g09434 | C2H6g13880 | LOC_Os06g14530 | Os06g0256800 | - | Detail |
| CX6g042391 | 6:6,917,070-6,922,227 | - | C1H6g06821 | C2H6g23574 | LOC_Os06g14540 | Os06g0256900 | OsGH9B3 | Detail |
| CX6g045791 | 6:6,932,865-6,936,018 | - | C1H6g28420 | C2H6g22071 | LOC_Os06g14550 | Os06g0257200 | - | Detail |
| CX6g041399 | 6:6,941,937-6,942,956 | - | - | C2H6g03777 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| CX6g044724 | 6:6,945,675-6,947,222 | + | C1H6g02316 | C2H6g04113 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| CX6g043290 | 6:6,965,456-6,966,502 | + | C1H6g09969 | C2H6g00648 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| CX6g045414 | 6:6,977,018-6,977,545 | + | C1H6g21869 | C2H6g21355 | LOC_Os06g14700 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g042386 | 6:7,015,491-7,015,994 | + | C1H6g23895 | C2H6g21355 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g042613 | 6:7,019,900-7,020,406 | + | C1H6g23895 | C2H6g21355 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| CX6g045764 | 6:7,022,667-7,037,143 | + | C1H6g11559 | C2H6g03619 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| CX6g044644 | 6:7,038,859-7,046,231 | - | C1H6g18024 | C2H6g01049 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| CX6g041615 | 6:7,091,968-7,092,474 | - | C1H6g12074 | C2H6g10609 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| CX6g045748 | 6:7,101,589-7,102,095 | + | C1H6g12074 | C2H6g10609 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| CX6g042529 | 6:7,103,494-7,104,150 | + | - | C2H6g05565 | - | - | - | Detail |
| CX6g041426 | 6:7,118,508-7,118,726 | + | - | - | - | Os07g0464001 | - | Detail |
| CX6g041283 | 6:7,128,503-7,129,800 | - | C1H6g28805 | C2H6g15261 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| CX6g042162 | 6:7,156,538-7,158,317 | + | - | - | - | Os06g0260250 | - | Detail |
| CX6g045707 | 6:7,156,721-7,158,202 | - | - | C2H6g21532 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| CX6g041851 | 6:7,160,579-7,160,815 | - | - | - | - | - | - | Detail |