| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13726 | 3:20,390,861-20,393,442 | + | C2H3g25116 | CX3g029359 | - | - | - | Detail |
| C1H3g03200 | 3:20,400,373-20,403,482 | + | C2H3g24537 | CX3g026919 | LOC_Os03g38720 | Os03g0583700 | OsUMP1 | Detail |
| C1H3g23310 | 3:20,409,091-20,411,260 | + | C2H3g24800 | CX3g030948 | LOC_Os03g38730 | Os03g0583800 | - | Detail |
| C1H3g04436 | 3:20,411,565-20,427,058 | - | C2H3g29289 | CX3g030903 | LOC_Os03g38740 | Os03g0583900 | - | Detail |
| C1H3g11527 | 3:20,435,050-20,436,973 | + | C2H3g12332 | CX3g028700 | LOC_Os03g38790 | Os03g0568500 | - | Detail |
| C1H3g11030 | 3:20,448,120-20,448,479 | - | C2H3g19485 | CX3g025305 | - | - | - | Detail |
| C1H3g31357 | 3:20,448,489-20,449,562 | - | C2H3g19485 | CX3g025305 | - | - | - | Detail |
| C1H3g22207 | 3:20,449,725-20,450,414 | - | C2H3g10367 | CX3g025305 | - | - | - | Detail |
| C1H3g12087 | 3:20,508,216-20,514,216 | - | C2H3g17956 | CX3g028633 | LOC_Os03g38930 | Os03g0586300 | - | Detail |
| C1H3g08754 | 3:20,516,713-20,518,665 | + | C2H3g00038 | CX3g026495 | LOC_Os03g38950 | Os03g0586500 | - | Detail |
| C1H3g06874 | 3:20,519,468-20,522,822 | - | C2H3g11125 | CX3g031261 | LOC_Os03g38960 | Os03g0586600 | - | Detail |
| C1H3g18468 | 3:20,526,963-20,539,604 | - | C2H3g25834 | CX3g028836 | LOC_Os03g38970 | Os03g0586700 | PALD | Detail |
| C1H3g11741 | 3:20,544,749-20,553,095 | - | C2H3g21968 | CX3g027203 | LOC_Os03g38980 | Os03g0586800 | - | Detail |
| C1H3g27042 | 3:20,553,245-20,559,759 | + | C2H3g04567 | CX3g026912 | LOC_Os03g38990 | Os03g0586900 | OsPLS2 | Detail |
| C1H3g17183 | 3:20,561,235-20,564,254 | + | C2H3g23894 | CX3g030907 | LOC_Os03g39000 | Os03g0587000 | - | Detail |
| C1H3g08966 | 3:20,564,750-20,566,265 | + | C2H3g20201 | CX3g026983 | LOC_Os03g39010 | Os03g0587100 | - | Detail |
| C1H3g03134 | 3:20,566,619-20,572,424 | - | C2H3g30660 | CX3g025439 | LOC_Os03g39020 | Os03g0587200 | - | Detail |
| C1H3g06709 | 3:20,589,787-20,592,096 | + | C2H3g22828 | CX3g026068 | LOC_Os03g39040 | Os03g0587600 | - | Detail |
| C1H3g00174 | 3:20,602,278-20,607,223 | + | C2H3g01127 | CX3g026068 | LOC_Os03g39129 | Os03g0588200 | - | Detail |
| C1H3g31500 | 3:20,616,598-20,619,354 | + | C2H3g05989 | CX3g026068 | LOC_Os03g39160 | Os03g0588600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044215 | 6:5,972,418-5,974,551 | + | C1H6g26485 | C2H6g01464 | LOC_Os06g13010 | Os06g0237100 | - | Detail |
| CX6g045007 | 6:5,975,365-5,980,470 | - | C1H6g11081 | C2H6g23390 | LOC_Os06g13020 | Os06g0237200 | OsPol lambda, OsPol λ | Detail |
| CX6g041998 | 6:5,981,102-5,986,490 | - | C1H6g11081 | C2H6g23390 | LOC_Os06g13030 | Os06g0237300 | - | Detail |
| CX6g043604 | 6:5,989,996-5,991,876 | - | C1H6g15168 | C2H6g15857 | LOC_Os06g13040 | Os06g0237400 | - | Detail |
| CX6g045393 | 6:5,998,957-6,003,931 | - | C1H6g18246 | C2H6g27185 | LOC_Os06g13050 | Os06g0237502 | YPD1 | Detail |
| CX6g043402 | 6:6,005,863-6,006,105 | - | - | - | - | - | - | Detail |
| CX6g045793 | 6:6,006,592-6,007,584 | - | C1H6g19805 | C2H6g13220 | LOC_Os06g13050 | Os06g0237600 | - | Detail |
| CX6g041472 | 6:6,009,097-6,012,379 | - | C1H6g10081 | C2H6g02865 | LOC_Os06g13060 | Os06g0237800 | - | Detail |
| CX6g042307 | 6:6,018,464-6,020,419 | - | C1H6g13122 | C2H6g29486 | LOC_Os06g13070 | Os06g0237900 | OsDML4 | Detail |
| CX6g041546 | 6:6,028,321-6,028,713 | + | - | - | - | - | - | Detail |
| CX6g043126 | 6:6,029,466-6,029,615 | + | - | - | - | Os07g0616100 | - | Detail |
| CX6g045133 | 6:6,030,695-6,032,242 | + | C1H6g16218 | C2H6g21943 | LOC_Os06g13080 | Os06g0238000 | - | Detail |
| CX6g041411 | 6:6,035,402-6,036,871 | + | C1H6g16218 | C2H6g19109 | LOC_Os06g13090 | Os06g0238200 | - | Detail |
| CX6g043840 | 6:6,037,356-6,040,093 | - | C1H6g03983 | C2H6g01461 | LOC_Os06g13100 | Os06g0238300 | - | Detail |
| CX6g044395 | 6:6,043,909-6,046,213 | - | C1H6g14587 | C2H6g12491 | LOC_Os06g13120 | - | - | Detail |
| CX6g045908 | 6:6,051,947-6,053,137 | - | - | C2H6g08086 | LOC_Os06g13140 | Os06g0238700 | - | Detail |
| CX6g042074 | 6:6,060,470-6,061,393 | - | - | C2H6g08173 | LOC_Os06g13160 | Os06g0238900 | - | Detail |
| CX6g044837 | 6:6,063,493-6,065,455 | + | C1H6g05829 | C2H6g13040 | LOC_Os06g13170 | Os06g0239000 | - | Detail |
| CX6g043197 | 6:6,066,426-6,067,541 | + | - | C2H6g04811 | LOC_Os06g13180 | Os06g0239100 | - | Detail |
| CX6g041269 | 6:6,075,184-6,075,474 | + | - | C2H6g27605 | LOC_Os06g13190 | Os06g0239200 | - | Detail |