| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03976 | 4:21,775,289-21,779,092 | + | C1H4g02468 | CX4g033880 | LOC_Os04g42570 | Os04g0504500 | - | Detail |
| C2H4g26755 | 4:21,780,931-21,784,591 | + | C1H4g08801 | CX4g034844 | LOC_Os04g42580 | Os04g0504600 | - | Detail |
| C2H4g20270 | 4:21,784,803-21,786,527 | - | C1H4g08459 | CX4g035367 | LOC_Os04g42590 | Os04g0504700 | - | Detail |
| C2H4g27949 | 4:21,787,811-21,794,217 | - | C1H4g18953 | CX4g034283 | LOC_Os04g42600 | Os04g0504800 | - | Detail |
| C2H4g13700 | 4:21,799,043-21,804,087 | + | C1H4g09949 | CX4g035894 | LOC_Os04g42610 | Os04g0505000 | - | Detail |
| C2H4g25893 | 4:21,808,733-21,810,094 | + | C1H4g26420 | CX4g033549 | LOC_Os04g42620 | Os04g0505200 | - | Detail |
| C2H4g26509 | 4:21,823,378-21,825,051 | - | - | CX4g036118 | LOC_Os04g42650 | Os04g0505400 | - | Detail |
| C2H4g26448 | 4:21,845,112-21,846,788 | - | C1H4g22256 | CX4g036362 | LOC_Os04g42670 | Os04g0505700 | - | Detail |
| C2H4g18722 | 4:21,853,620-21,855,080 | - | C1H4g20808 | CX4g034590 | LOC_Os04g42690 | Os04g0506000 | - | Detail |
| C2H4g22704 | 4:21,856,222-21,860,943 | - | C1H4g29579 | CX4g031779 | LOC_Os04g42700 | Os04g0506100 | - | Detail |
| C2H4g25253 | 4:21,875,815-21,879,797 | - | C1H4g02105 | CX4g035900 | LOC_Os04g42720 | Os04g0506300 | - | Detail |
| C2H4g08397 | 4:21,882,101-21,884,533 | + | C1H4g26221 | CX4g033680 | LOC_Os04g42740 | Os04g0506700 | SDRLK-29 | Detail |
| C2H4g07244 | 4:21,887,494-21,888,678 | + | - | - | LOC_Os04g42760 | Os04g0506800 | OsSTLP3 | Detail |
| C2H4g24051 | 4:21,899,801-21,905,681 | - | C1H4g22828 | CX4g032341 | LOC_Os04g42770 | Os04g0506900 | - | Detail |
| C2H4g08751 | 4:21,908,962-21,922,319 | - | C1H4g00682 | CX4g032669 | LOC_Os04g42784 | Os04g0507000 | - | Detail |
| C2H4g06679 | 4:21,923,349-21,924,878 | - | C1H4g13723 | CX4g035355 | LOC_Os04g42800 | - | - | Detail |
| C2H4g07568 | 4:21,926,839-21,928,280 | - | C1H4g11839 | CX4g032324 | LOC_Os04g42830 | Os04g0507400 | - | Detail |
| C2H4g22062 | 4:21,930,335-21,932,110 | - | C1H4g04437 | CX4g036634 | LOC_Os04g42830 | Os04g0507400 | - | Detail |
| C2H4g14077 | 4:21,933,409-21,944,824 | - | C1H4g00145 | CX4g034196 | LOC_Os04g42840 | Os04g0507500 | - | Detail |
| C2H4g29137 | 4:21,947,969-21,948,358 | - | C1H4g01460 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001337 | 1:24,537,851-24,541,408 | - | C1H1g05578 | C2H1g07292 | LOC_Os01g48200 | Os01g0672500 | OsGSL2, WS1 | Detail |
| CX1g002984 | 1:24,542,846-24,543,103 | + | - | - | - | - | - | Detail |
| CX1g002153 | 1:24,557,283-24,558,185 | - | C1H1g25440 | C2H3g22127 | - | Os01g0630900 | - | Detail |
| CX1g001818 | 1:24,562,161-24,563,585 | - | C1H1g14323 | C2H1g13364 | LOC_Os11g13920 | Os01g0838100 | - | Detail |
| CX1g000126 | 1:24,571,050-24,576,577 | + | C1H1g25004 | C2H1g08595 | LOC_Os01g48210 | Os01g0672700 | - | Detail |
| CX1g006595 | 1:24,577,824-24,579,941 | - | C1H1g22345 | C2H1g25350 | LOC_Os01g48220 | Os01g0672800 | - | Detail |
| CX1g000091 | 1:24,594,822-24,595,148 | - | - | - | LOC_Os04g06290 | - | - | Detail |
| CX1g004407 | 1:24,602,355-24,603,530 | + | C1H1g31872 | - | LOC_Os01g48250 | Os01g0673300 | - | Detail |
| CX1g004722 | 1:24,606,216-24,612,497 | - | C1H1g22730 | C2H1g23016 | LOC_Os01g48270 | Os01g0673500 | - | Detail |
| CX1g000015 | 1:24,614,019-24,616,620 | - | C1H1g16906 | C2H1g16188 | LOC_Os01g48280 | Os01g0673600 | OsUbc13, Ubc13, OsUBC47, UBC47 | Detail |
| CX1g005175 | 1:24,617,164-24,617,313 | - | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g005558 | 1:24,622,863-24,623,396 | + | C1H1g29519 | C2H1g27008 | LOC_Os01g48290 | Os01g0673700 | - | Detail |
| CX1g003719 | 1:24,625,491-24,628,124 | - | C1H1g26426 | C2H1g05416 | LOC_Os01g48300 | Os01g0673800 | - | Detail |
| CX1g005342 | 1:24,628,659-24,631,843 | - | C1H1g29626 | C2H1g03818 | LOC_Os01g48310 | Os01g0673900 | - | Detail |
| CX1g007216 | 1:24,632,955-24,633,158 | + | - | - | - | - | - | Detail |
| CX1g000061 | 1:24,635,139-24,635,303 | + | C1H4g06341 | - | - | - | - | Detail |
| CX1g005053 | 1:24,640,304-24,641,308 | - | - | - | LOC_Os01g48320 | Os01g0674000 | - | Detail |
| CX1g002269 | 1:24,642,732-24,649,818 | - | C1H1g16435 | C2H1g08537 | LOC_Os01g48330 | Os01g0674100 | - | Detail |
| CX1g002853 | 1:24,663,511-24,663,898 | + | C1H1g18336 | C2H1g09956 | LOC_Os01g48360 | Os01g0674400 | - | Detail |
| CX1g000620 | 1:24,665,366-24,669,708 | - | C1H1g27753 | C2H1g02713 | LOC_Os01g48370 | Os01g0674500 | - | Detail |