| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g17735 | 7:5,268,001-5,272,672 | - | C1H7g25098 | CX7g048520 | LOC_Os07g10610 | Os07g0206800 | - | Detail |
| C2H7g12236 | 7:5,273,615-5,274,866 | + | C1H3g21319 | CX7g049072 | LOC_Os07g10620 | Os07g0206900 | - | Detail |
| C2H7g27744 | 7:5,278,505-5,281,566 | - | C1H7g18540 | CX7g048336 | LOC_Os07g10630 | Os07g0207100 | - | Detail |
| C2H7g07379 | 7:5,290,208-5,291,851 | + | C1H7g17000 | CX7g050419 | LOC_Os07g10660 | Os07g0207400 | - | Detail |
| C2H7g18103 | 7:5,294,689-5,296,433 | - | C1H7g21516 | CX7g048271 | LOC_Os07g10680 | Os07g0208100 | - | Detail |
| C2H7g20808 | 7:5,299,369-5,299,731 | - | - | - | - | - | - | Detail |
| C2H7g12540 | 7:5,299,413-5,305,169 | + | C1H7g09891 | CX7g050103 | LOC_Os07g10690 | Os07g0207700 | - | Detail |
| C2H7g12118 | 7:5,306,240-5,307,888 | - | C1H7g14965 | CX7g046907 | LOC_Os07g10700 | Os07g0208100 | - | Detail |
| C2H7g29159 | 7:5,311,001-5,312,274 | - | C1H7g14074 | - | - | Os07g0207800 | - | Detail |
| C2H7g03718 | 7:5,313,974-5,314,629 | - | C1H7g18277 | CX7g049746 | LOC_Os07g10720 | Os07g0208000 | - | Detail |
| C2H7g19228 | 7:5,317,219-5,318,016 | + | C1H7g05753 | CX7g050210 | LOC_Os07g10730 | Os07g0208100 | - | Detail |
| C2H7g05389 | 7:5,343,983-5,350,020 | - | C1H7g22831 | CX7g049681 | LOC_Os07g10770 | Os07g0208500 | - | Detail |
| C2H7g07260 | 7:5,359,018-5,359,899 | + | C1H7g03861 | CX7g047349 | LOC_Os07g10780 | Os07g0208600 | - | Detail |
| C2H7g09089 | 7:5,368,706-5,377,226 | + | C1H7g02296 | CX7g046910 | LOC_Os07g10820 | Os07g0208900 | - | Detail |
| C2H7g07491 | 7:5,378,256-5,382,838 | + | C1H7g11446 | CX7g049640 | LOC_Os07g10830 | Os07g0209000 | - | Detail |
| C2H7g18286 | 7:5,383,486-5,387,060 | - | C1H7g13106 | CX7g046186 | LOC_Os07g10840 | Os07g0209100 | - | Detail |
| C2H7g17945 | 7:5,418,115-5,427,025 | + | C1H7g17349 | CX7g047789 | LOC_Os07g10860 | Os07g0209401 | - | Detail |
| C2H7g09351 | 7:5,427,210-5,431,235 | - | C1H7g13721 | CX7g047966 | LOC_Os07g10870 | Os07g0209600 | - | Detail |
| C2H7g26125 | 7:5,432,016-5,433,266 | + | C1H7g22752 | CX7g049067 | LOC_Os07g10880 | Os07g0209700 | - | Detail |
| C2H7g19591 | 7:5,488,946-5,492,782 | + | C1H7g20089 | CX7g047335 | LOC_Os07g10890 | Os07g0209800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001337 | 1:24,537,851-24,541,408 | - | C1H1g05578 | C2H1g07292 | LOC_Os01g48200 | Os01g0672500 | OsGSL2, WS1 | Detail |
| CX1g002984 | 1:24,542,846-24,543,103 | + | - | - | - | - | - | Detail |
| CX1g002153 | 1:24,557,283-24,558,185 | - | C1H1g25440 | C2H3g22127 | - | Os01g0630900 | - | Detail |
| CX1g001818 | 1:24,562,161-24,563,585 | - | C1H1g14323 | C2H1g13364 | LOC_Os11g13920 | Os01g0838100 | - | Detail |
| CX1g000126 | 1:24,571,050-24,576,577 | + | C1H1g25004 | C2H1g08595 | LOC_Os01g48210 | Os01g0672700 | - | Detail |
| CX1g006595 | 1:24,577,824-24,579,941 | - | C1H1g22345 | C2H1g25350 | LOC_Os01g48220 | Os01g0672800 | - | Detail |
| CX1g000091 | 1:24,594,822-24,595,148 | - | - | - | LOC_Os04g06290 | - | - | Detail |
| CX1g004407 | 1:24,602,355-24,603,530 | + | C1H1g31872 | - | LOC_Os01g48250 | Os01g0673300 | - | Detail |
| CX1g004722 | 1:24,606,216-24,612,497 | - | C1H1g22730 | C2H1g23016 | LOC_Os01g48270 | Os01g0673500 | - | Detail |
| CX1g000015 | 1:24,614,019-24,616,620 | - | C1H1g16906 | C2H1g16188 | LOC_Os01g48280 | Os01g0673600 | OsUbc13, Ubc13, OsUBC47, UBC47 | Detail |
| CX1g005175 | 1:24,617,164-24,617,313 | - | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g005558 | 1:24,622,863-24,623,396 | + | C1H1g29519 | C2H1g27008 | LOC_Os01g48290 | Os01g0673700 | - | Detail |
| CX1g003719 | 1:24,625,491-24,628,124 | - | C1H1g26426 | C2H1g05416 | LOC_Os01g48300 | Os01g0673800 | - | Detail |
| CX1g005342 | 1:24,628,659-24,631,843 | - | C1H1g29626 | C2H1g03818 | LOC_Os01g48310 | Os01g0673900 | - | Detail |
| CX1g007216 | 1:24,632,955-24,633,158 | + | - | - | - | - | - | Detail |
| CX1g000061 | 1:24,635,139-24,635,303 | + | C1H4g06341 | - | - | - | - | Detail |
| CX1g005053 | 1:24,640,304-24,641,308 | - | - | - | LOC_Os01g48320 | Os01g0674000 | - | Detail |
| CX1g002269 | 1:24,642,732-24,649,818 | - | C1H1g16435 | C2H1g08537 | LOC_Os01g48330 | Os01g0674100 | - | Detail |
| CX1g002853 | 1:24,663,511-24,663,898 | + | C1H1g18336 | C2H1g09956 | LOC_Os01g48360 | Os01g0674400 | - | Detail |
| CX1g000620 | 1:24,665,366-24,669,708 | - | C1H1g27753 | C2H1g02713 | LOC_Os01g48370 | Os01g0674500 | - | Detail |