| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g05948 | 11:11,675,970-11,676,368 | - | C2H11g30440 | CX5g038691 | LOC_Os03g37170 | - | - | Detail |
| C1H11g01295 | 11:11,730,083-11,731,620 | - | C2H11g16035 | CX11g011878 | LOC_Os11g22960 | Os11g0421800 | - | Detail |
| C1H11g25675 | 11:11,807,002-11,820,334 | + | C2H11g27186 | CX11g014487 | LOC_Os11g23170 | Os11g0423800 | - | Detail |
| C1H11g10519 | 11:11,837,689-11,839,435 | - | C2H11g29543 | CX11g011672 | LOC_Os11g23210 | - | - | Detail |
| C1H11g18938 | 11:11,839,502-11,840,328 | - | C2H11g11761 | - | LOC_Os11g23210 | - | - | Detail |
| C1H11g21447 | 11:11,864,424-11,865,613 | - | C2H11g23819 | CX11g014793 | LOC_Os11g23220 | Os11g0424400 | - | Detail |
| C1H11g13612 | 11:11,888,009-11,890,304 | + | C2H11g23448 | - | - | - | - | Detail |
| C1H11g03066 | 11:11,956,196-11,957,382 | + | C2H11g01467 | CX11g012417 | LOC_Os11g23770 | Os11g0425100 | - | Detail |
| C1H11g10419 | 11:11,969,664-11,975,316 | - | C2H11g00709 | CX11g013692 | LOC_Os11g23790 | Os11g0425300 | - | Detail |
| C1H11g07520 | 11:11,988,127-11,988,429 | - | C2H11g11525 | CX11g013945 | - | Os11g0425600 | - | Detail |
| C1H11g16842 | 11:12,002,707-12,005,127 | - | C2H11g26235 | CX11g013235 | LOC_Os11g23890 | Os11g0235200 | SP1, sp, SP | Detail |
| C1H11g26574 | 11:12,048,464-12,049,096 | + | C2H11g20453 | CX11g011906 | LOC_Os11g24140 | Os11g0426400 | - | Detail |
| C1H11g07243 | 11:12,054,267-12,058,917 | - | C2H11g26529 | CX11g013563 | LOC_Os11g24050 | Os11g0427500 | - | Detail |
| C1H11g06634 | 11:12,129,943-12,135,045 | + | C2H11g16339 | - | - | - | - | Detail |
| C1H11g16340 | 11:12,140,310-12,140,792 | + | C2H11g26937 | CX11g011856 | LOC_Os10g06860 | Os11g0272900 | - | Detail |
| C1H11g04650 | 11:12,159,871-12,161,583 | - | C2H11g00986 | CX11g011902 | LOC_Os02g24780 | Os04g0206200 | - | Detail |
| C1H11g23996 | 11:12,162,375-12,165,129 | - | C2H11g22821 | CX11g011902 | LOC_Os01g44200 | Os11g0671600 | - | Detail |
| C1H11g20815 | 11:12,274,365-12,275,549 | + | C2H11g29067 | CX11g011349 | - | - | - | Detail |
| C1H11g00224 | 11:12,303,622-12,304,451 | + | C2H11g23049 | CX11g011035 | LOC_Os11g24140 | Os11g0428800 | - | Detail |
| C1H11g17648 | 11:12,324,398-12,330,216 | - | C2H11g24073 | CX11g012589 | LOC_Os11g24170 | Os11g0429100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001337 | 1:24,537,851-24,541,408 | - | C1H1g05578 | C2H1g07292 | LOC_Os01g48200 | Os01g0672500 | OsGSL2, WS1 | Detail |
| CX1g002984 | 1:24,542,846-24,543,103 | + | - | - | - | - | - | Detail |
| CX1g002153 | 1:24,557,283-24,558,185 | - | C1H1g25440 | C2H3g22127 | - | Os01g0630900 | - | Detail |
| CX1g001818 | 1:24,562,161-24,563,585 | - | C1H1g14323 | C2H1g13364 | LOC_Os11g13920 | Os01g0838100 | - | Detail |
| CX1g000126 | 1:24,571,050-24,576,577 | + | C1H1g25004 | C2H1g08595 | LOC_Os01g48210 | Os01g0672700 | - | Detail |
| CX1g006595 | 1:24,577,824-24,579,941 | - | C1H1g22345 | C2H1g25350 | LOC_Os01g48220 | Os01g0672800 | - | Detail |
| CX1g000091 | 1:24,594,822-24,595,148 | - | - | - | LOC_Os04g06290 | - | - | Detail |
| CX1g004407 | 1:24,602,355-24,603,530 | + | C1H1g31872 | - | LOC_Os01g48250 | Os01g0673300 | - | Detail |
| CX1g004722 | 1:24,606,216-24,612,497 | - | C1H1g22730 | C2H1g23016 | LOC_Os01g48270 | Os01g0673500 | - | Detail |
| CX1g000015 | 1:24,614,019-24,616,620 | - | C1H1g16906 | C2H1g16188 | LOC_Os01g48280 | Os01g0673600 | OsUbc13, Ubc13, OsUBC47, UBC47 | Detail |
| CX1g005175 | 1:24,617,164-24,617,313 | - | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g005558 | 1:24,622,863-24,623,396 | + | C1H1g29519 | C2H1g27008 | LOC_Os01g48290 | Os01g0673700 | - | Detail |
| CX1g003719 | 1:24,625,491-24,628,124 | - | C1H1g26426 | C2H1g05416 | LOC_Os01g48300 | Os01g0673800 | - | Detail |
| CX1g005342 | 1:24,628,659-24,631,843 | - | C1H1g29626 | C2H1g03818 | LOC_Os01g48310 | Os01g0673900 | - | Detail |
| CX1g007216 | 1:24,632,955-24,633,158 | + | - | - | - | - | - | Detail |
| CX1g000061 | 1:24,635,139-24,635,303 | + | C1H4g06341 | - | - | - | - | Detail |
| CX1g005053 | 1:24,640,304-24,641,308 | - | - | - | LOC_Os01g48320 | Os01g0674000 | - | Detail |
| CX1g002269 | 1:24,642,732-24,649,818 | - | C1H1g16435 | C2H1g08537 | LOC_Os01g48330 | Os01g0674100 | - | Detail |
| CX1g002853 | 1:24,663,511-24,663,898 | + | C1H1g18336 | C2H1g09956 | LOC_Os01g48360 | Os01g0674400 | - | Detail |
| CX1g000620 | 1:24,665,366-24,669,708 | - | C1H1g27753 | C2H1g02713 | LOC_Os01g48370 | Os01g0674500 | - | Detail |