| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g00923 | 9:2,066,181-2,066,561 | + | C2H9g11221 | CX9g056587 | LOC_Os09g04624 | Os09g0132200 | - | Detail |
| C1H9g17567 | 9:2,076,246-2,077,694 | + | C2H9g11221 | CX9g056587 | LOC_Os09g04624 | Os09g0132200 | - | Detail |
| C1H9g25123 | 9:2,114,157-2,117,649 | - | C2H9g26710 | CX9g055949 | LOC_Os09g04670 | Os09g0132600 | OsMORF8-1 | Detail |
| C1H9g00018 | 9:2,125,894-2,128,290 | + | C2H9g12342 | CX9g058101 | LOC_Os09g04710 | Os09g0132900 | - | Detail |
| C1H9g13386 | 9:2,130,600-2,132,740 | - | C2H9g28536 | CX9g056234 | LOC_Os09g04720 | Os09g0133000 | - | Detail |
| C1H9g21676 | 9:2,137,114-2,141,853 | - | C2H9g12722 | CX9g056571 | LOC_Os09g04730 | Os09g0133200 | - | Detail |
| C1H9g18841 | 9:2,161,684-2,164,175 | + | C2H9g02102 | CX9g056741 | LOC_Os09g04790 | Os09g0133600 | - | Detail |
| C1H9g06051 | 9:2,180,377-2,184,547 | + | C2H9g30446 | CX9g054843 | LOC_Os09g04800 | Os09g0133700 | - | Detail |
| C1H9g04091 | 9:2,185,240-2,188,873 | - | C2H9g23487 | CX9g057963 | LOC_Os09g04810 | Os09g0133800 | - | Detail |
| C1H9g27229 | 9:2,207,644-2,211,037 | + | C2H9g09354 | CX9g057669 | LOC_Os09g04880 | Os09g0134400 | - | Detail |
| C1H9g22500 | 9:2,211,916-2,226,581 | - | C2H9g17319 | CX9g055891 | LOC_Os09g04890 | Os09g0134500 | OsTrx1, SDG723, OsSET33 | Detail |
| C1H9g06373 | 9:2,250,525-2,251,998 | - | C2H9g01165 | CX9g057577 | - | - | - | Detail |
| C1H9g25261 | 9:2,283,583-2,283,954 | - | - | - | - | - | - | Detail |
| C1H9g31813 | 9:2,399,692-2,401,443 | + | C2H9g09608 | CX9g057837 | LOC_Os09g05030 | Os09g0135800 | - | Detail |
| C1H9g09075 | 9:2,404,721-2,409,661 | - | C2H9g13689 | CX9g057815 | LOC_Os09g05020 | Os09g0135700 | OsPFA-DSP1 | Detail |
| C1H9g05034 | 9:2,415,460-2,415,966 | + | C2H9g25128 | CX9g055083 | - | - | - | Detail |
| C1H9g29941 | 9:2,677,442-2,682,423 | - | C2H9g20248 | CX9g057145 | LOC_Os09g06230 | Os09g0237600 | - | Detail |
| C1H9g27406 | 9:2,709,931-2,710,493 | + | - | - | - | - | - | Detail |
| C1H9g17951 | 9:2,713,164-2,714,055 | + | - | - | LOC_Os09g04460 | - | - | Detail |
| C1H9g27131 | 9:2,745,042-2,745,559 | + | C2H9g17568 | CX9g056399 | - | Os09g0238700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001337 | 1:24,537,851-24,541,408 | - | C1H1g05578 | C2H1g07292 | LOC_Os01g48200 | Os01g0672500 | OsGSL2, WS1 | Detail |
| CX1g002984 | 1:24,542,846-24,543,103 | + | - | - | - | - | - | Detail |
| CX1g002153 | 1:24,557,283-24,558,185 | - | C1H1g25440 | C2H3g22127 | - | Os01g0630900 | - | Detail |
| CX1g001818 | 1:24,562,161-24,563,585 | - | C1H1g14323 | C2H1g13364 | LOC_Os11g13920 | Os01g0838100 | - | Detail |
| CX1g000126 | 1:24,571,050-24,576,577 | + | C1H1g25004 | C2H1g08595 | LOC_Os01g48210 | Os01g0672700 | - | Detail |
| CX1g006595 | 1:24,577,824-24,579,941 | - | C1H1g22345 | C2H1g25350 | LOC_Os01g48220 | Os01g0672800 | - | Detail |
| CX1g000091 | 1:24,594,822-24,595,148 | - | - | - | LOC_Os04g06290 | - | - | Detail |
| CX1g004407 | 1:24,602,355-24,603,530 | + | C1H1g31872 | - | LOC_Os01g48250 | Os01g0673300 | - | Detail |
| CX1g004722 | 1:24,606,216-24,612,497 | - | C1H1g22730 | C2H1g23016 | LOC_Os01g48270 | Os01g0673500 | - | Detail |
| CX1g000015 | 1:24,614,019-24,616,620 | - | C1H1g16906 | C2H1g16188 | LOC_Os01g48280 | Os01g0673600 | OsUbc13, Ubc13, OsUBC47, UBC47 | Detail |
| CX1g005175 | 1:24,617,164-24,617,313 | - | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g005558 | 1:24,622,863-24,623,396 | + | C1H1g29519 | C2H1g27008 | LOC_Os01g48290 | Os01g0673700 | - | Detail |
| CX1g003719 | 1:24,625,491-24,628,124 | - | C1H1g26426 | C2H1g05416 | LOC_Os01g48300 | Os01g0673800 | - | Detail |
| CX1g005342 | 1:24,628,659-24,631,843 | - | C1H1g29626 | C2H1g03818 | LOC_Os01g48310 | Os01g0673900 | - | Detail |
| CX1g007216 | 1:24,632,955-24,633,158 | + | - | - | - | - | - | Detail |
| CX1g000061 | 1:24,635,139-24,635,303 | + | C1H4g06341 | - | - | - | - | Detail |
| CX1g005053 | 1:24,640,304-24,641,308 | - | - | - | LOC_Os01g48320 | Os01g0674000 | - | Detail |
| CX1g002269 | 1:24,642,732-24,649,818 | - | C1H1g16435 | C2H1g08537 | LOC_Os01g48330 | Os01g0674100 | - | Detail |
| CX1g002853 | 1:24,663,511-24,663,898 | + | C1H1g18336 | C2H1g09956 | LOC_Os01g48360 | Os01g0674400 | - | Detail |
| CX1g000620 | 1:24,665,366-24,669,708 | - | C1H1g27753 | C2H1g02713 | LOC_Os01g48370 | Os01g0674500 | - | Detail |