| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g05313 | 6:23,334,802-23,335,155 | - | - | CX6g045194 | LOC_Os06g44470 | Os06g0655200 | - | Detail |
| C1H6g23389 | 6:23,342,739-23,343,890 | - | - | CX6g044542 | LOC_Os06g44500 | Os06g0655500 | - | Detail |
| C1H6g28097 | 6:23,367,981-23,371,273 | + | C2H6g01905 | CX6g043649 | LOC_Os06g44540 | Os06g0656000 | - | Detail |
| C1H6g10341 | 6:23,372,894-23,373,190 | + | - | CX6g045786 | - | - | - | Detail |
| C1H6g02367 | 6:23,379,553-23,383,004 | + | C2H6g04263 | CX6g045530 | LOC_Os06g44610 | Os06g0656300 | - | Detail |
| C1H6g11793 | 6:23,388,067-23,392,345 | - | C2H6g09867 | CX6g043922 | LOC_Os06g44620 | Os06g0656500 | - | Detail |
| C1H6g27191 | 6:23,395,056-23,396,519 | + | - | CX6g042257 | LOC_Os06g44630 | Os12g0157400 | - | Detail |
| C1H6g24156 | 6:23,397,018-23,397,943 | + | C2H6g09901 | CX6g043794 | LOC_Os06g44640 | Os06g0656700 | - | Detail |
| C1H6g25164 | 6:23,400,141-23,400,989 | - | - | CX6g045982 | LOC_Os06g44660 | Os06g0656800 | - | Detail |
| C1H6g20965 | 6:23,443,440-23,443,990 | + | C2H6g17516 | CX6g044635 | LOC_Os06g44770 | Os06g0657500 | HL6 | Detail |
| C1H6g08891 | 6:23,444,986-23,446,988 | + | C2H6g23305 | CX6g044635 | LOC_Os06g44750 | Os06g0604000 | OsWR2 | Detail |
| C1H6g29011 | 6:23,456,908-23,461,678 | - | C2H6g09743 | CX6g044954 | LOC_Os06g44750 | Os06g0657500 | HL6 | Detail |
| C1H6g19199 | 6:23,466,822-23,468,463 | + | C2H6g29287 | CX6g041306 | LOC_Os06g44780 | Os06g0658200 | - | Detail |
| C1H6g24012 | 6:23,479,098-23,484,214 | + | C2H6g23123 | CX6g041732 | LOC_Os06g44810 | Os06g0658500 | - | Detail |
| C1H6g21732 | 6:23,494,046-23,499,777 | + | C2H6g07098 | CX6g042928 | LOC_Os06g44840 | Os06g0658900 | OsSGD1, OsVTE2, SGD1 | Detail |
| C1H6g14883 | 6:23,519,430-23,521,287 | + | C2H6g16197 | CX6g041927 | LOC_Os06g44860 | Os06g0659100 | OsSPL10, SST | Detail |
| C1H6g12120 | 6:23,529,605-23,531,945 | - | C2H6g08178 | - | LOC_Os06g44870 | - | - | Detail |
| C1H6g21944 | 6:23,532,512-23,536,810 | - | C2H6g16565 | CX6g044819 | LOC_Os06g44880 | Os06g0659200 | - | Detail |
| C1H6g13811 | 6:23,540,436-23,549,656 | - | C2H6g07904 | CX6g045716 | LOC_Os06g44890 | Os06g0659300 | - | Detail |
| C1H6g31391 | 6:23,553,739-23,554,257 | + | C2H6g19745 | CX6g045501 | LOC_Os06g44900 | Os06g0659400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001337 | 1:24,537,851-24,541,408 | - | C1H1g05578 | C2H1g07292 | LOC_Os01g48200 | Os01g0672500 | OsGSL2, WS1 | Detail |
| CX1g002984 | 1:24,542,846-24,543,103 | + | - | - | - | - | - | Detail |
| CX1g002153 | 1:24,557,283-24,558,185 | - | C1H1g25440 | C2H3g22127 | - | Os01g0630900 | - | Detail |
| CX1g001818 | 1:24,562,161-24,563,585 | - | C1H1g14323 | C2H1g13364 | LOC_Os11g13920 | Os01g0838100 | - | Detail |
| CX1g000126 | 1:24,571,050-24,576,577 | + | C1H1g25004 | C2H1g08595 | LOC_Os01g48210 | Os01g0672700 | - | Detail |
| CX1g006595 | 1:24,577,824-24,579,941 | - | C1H1g22345 | C2H1g25350 | LOC_Os01g48220 | Os01g0672800 | - | Detail |
| CX1g000091 | 1:24,594,822-24,595,148 | - | - | - | LOC_Os04g06290 | - | - | Detail |
| CX1g004407 | 1:24,602,355-24,603,530 | + | C1H1g31872 | - | LOC_Os01g48250 | Os01g0673300 | - | Detail |
| CX1g004722 | 1:24,606,216-24,612,497 | - | C1H1g22730 | C2H1g23016 | LOC_Os01g48270 | Os01g0673500 | - | Detail |
| CX1g000015 | 1:24,614,019-24,616,620 | - | C1H1g16906 | C2H1g16188 | LOC_Os01g48280 | Os01g0673600 | OsUbc13, Ubc13, OsUBC47, UBC47 | Detail |
| CX1g005175 | 1:24,617,164-24,617,313 | - | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g005558 | 1:24,622,863-24,623,396 | + | C1H1g29519 | C2H1g27008 | LOC_Os01g48290 | Os01g0673700 | - | Detail |
| CX1g003719 | 1:24,625,491-24,628,124 | - | C1H1g26426 | C2H1g05416 | LOC_Os01g48300 | Os01g0673800 | - | Detail |
| CX1g005342 | 1:24,628,659-24,631,843 | - | C1H1g29626 | C2H1g03818 | LOC_Os01g48310 | Os01g0673900 | - | Detail |
| CX1g007216 | 1:24,632,955-24,633,158 | + | - | - | - | - | - | Detail |
| CX1g000061 | 1:24,635,139-24,635,303 | + | C1H4g06341 | - | - | - | - | Detail |
| CX1g005053 | 1:24,640,304-24,641,308 | - | - | - | LOC_Os01g48320 | Os01g0674000 | - | Detail |
| CX1g002269 | 1:24,642,732-24,649,818 | - | C1H1g16435 | C2H1g08537 | LOC_Os01g48330 | Os01g0674100 | - | Detail |
| CX1g002853 | 1:24,663,511-24,663,898 | + | C1H1g18336 | C2H1g09956 | LOC_Os01g48360 | Os01g0674400 | - | Detail |
| CX1g000620 | 1:24,665,366-24,669,708 | - | C1H1g27753 | C2H1g02713 | LOC_Os01g48370 | Os01g0674500 | - | Detail |