| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g25593 | 1:37,549,145-37,551,244 | + | C2H1g23027 | CX1g004319 | LOC_Os01g72960 | Os01g0960000 | - | Detail |
| C1H1g17830 | 1:37,559,817-37,562,654 | + | C2H1g16511 | CX1g002518 | LOC_Os01g72970 | Os01g0960200 | - | Detail |
| C1H1g23836 | 1:37,563,304-37,569,571 | - | C2H1g22651 | CX1g007108 | LOC_Os01g72980 | Os01g0960300 | - | Detail |
| C1H1g14029 | 1:37,570,181-37,582,538 | - | C2H1g16152 | CX1g006984 | LOC_Os01g72990 | Os01g0960400 | - | Detail |
| C1H1g11322 | 1:37,589,237-37,590,549 | + | C2H1g08037 | CX1g001646 | - | Os01g0330200 | - | Detail |
| C1H1g17225 | 1:37,590,892-37,595,160 | - | C2H1g18993 | CX1g006298 | LOC_Os01g73000 | Os01g0960500 | - | Detail |
| C1H1g29525 | 1:37,598,330-37,600,614 | - | C2H1g16817 | CX1g002410 | LOC_Os01g73005 | Os01g0960600 | - | Detail |
| C1H1g11960 | 1:37,601,413-37,603,166 | - | C2H1g12796 | CX1g003397 | LOC_Os10g33910 | Os01g0960800 | - | Detail |
| C1H1g30659 | 1:37,605,288-37,608,762 | - | C2H1g21477 | CX1g004417 | LOC_Os01g68510 | Os01g0960900 | - | Detail |
| C1H1g23099 | 1:37,611,693-37,611,950 | + | - | CX1g002602 | LOC_Os01g73024 | Os01g0961000 | - | Detail |
| C1H1g25253 | 1:37,617,505-37,621,414 | + | C2H1g15167 | CX1g004462 | LOC_Os01g73040 | Os01g0961200 | - | Detail |
| C1H1g00215 | 1:37,625,296-37,626,462 | + | C2H1g03839 | CX1g002423 | LOC_Os01g73110 | Os01g0962100 | - | Detail |
| C1H1g24375 | 1:37,626,978-37,630,140 | - | C2H1g19213 | CX1g001400 | LOC_Os01g73120 | Os01g0962200 | - | Detail |
| C1H1g10143 | 1:37,631,278-37,632,147 | + | C2H1g20002 | CX1g002991 | LOC_Os01g73130 | Os01g0962300 | - | Detail |
| C1H1g04050 | 1:37,632,660-37,634,570 | - | C2H1g29126 | CX1g001063 | LOC_Os01g73140 | Os01g0962400 | - | Detail |
| C1H1g12385 | 1:37,635,147-37,637,853 | - | C2H1g16743 | CX1g000098 | LOC_Os01g73150 | Os01g0962500 | - | Detail |
| C1H1g24570 | 1:37,638,607-37,640,785 | - | C2H1g29119 | CX1g002133 | LOC_Os01g73160 | Os01g0962600 | - | Detail |
| C1H1g28549 | 1:37,642,947-37,645,994 | + | C2H1g24930 | CX1g004177 | LOC_Os01g73170 | Os01g0962700 | - | Detail |
| C1H1g28334 | 1:37,649,644-37,650,893 | + | C2H1g06611 | CX1g005398 | LOC_Os01g73190 | Os01g0962900 | - | Detail |
| C1H1g16502 | 1:37,653,097-37,654,173 | + | C2H1g10822 | CX1g001029 | LOC_Os01g73200 | Os01g0963000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044633 | 6:5,620,920-5,623,937 | - | C1H6g00685 | C2H6g25379 | LOC_Os06g12330 | Os06g0228600 | - | Detail |
| CX6g044499 | 6:5,627,654-5,630,966 | - | C1H6g13390 | C2H6g08385 | LOC_Os06g12350 | Os06g0228800 | - | Detail |
| CX6g044711 | 6:5,632,613-5,634,556 | + | C1H6g22566 | C2H6g19334 | LOC_Os06g12360 | Os06g0228900 | - | Detail |
| CX6g044911 | 6:5,635,672-5,636,730 | + | C1H6g15439 | C2H6g28900 | LOC_Os06g12360 | Os06g0228950 | - | Detail |
| CX6g043477 | 6:5,637,445-5,640,204 | - | C1H6g14481 | C2H6g05024 | LOC_Os06g12370 | Os06g0229000 | - | Detail |
| CX6g043791 | 6:5,651,304-5,654,639 | + | C1H6g30867 | C2H6g02329 | LOC_Os06g12390 | Os06g0229200 | GalT | Detail |
| CX6g041469 | 6:5,660,937-5,665,483 | + | C1H6g06761 | C2H6g13941 | LOC_Os06g12400 | Os06g0229300 | - | Detail |
| CX6g045028 | 6:5,667,402-5,669,008 | + | C1H6g31791 | C2H6g19443 | LOC_Os06g12410 | Os06g0257600 | - | Detail |
| CX6g044435 | 6:5,670,609-5,675,017 | + | C1H6g30269 | C2H6g15100 | LOC_Os06g12450 | Os06g0229800 | ALK, alk, SSII-3, OsSSIIa, OsSSII-3, SSIIa, SSS2A, OsSSIIaChr6 | Detail |
| CX6g044319 | 6:5,676,877-5,677,302 | - | - | - | LOC_Os06g12455 | Os06g0230000 | - | Detail |
| CX6g043509 | 6:5,679,818-5,679,973 | - | - | - | - | Os07g0616100 | - | Detail |
| CX6g041722 | 6:5,680,287-5,685,129 | + | C1H6g02539 | C2H6g02967 | LOC_Os06g12460 | Os06g0230100 | OsCSLA3 | Detail |
| CX6g044662 | 6:5,688,658-5,688,996 | - | - | - | - | - | - | Detail |
| CX6g043899 | 6:5,693,580-5,694,389 | + | C1H6g20958 | C2H6g18393 | LOC_Os06g12500 | Os06g0231050 | CASP3, OsCASP3 | Detail |
| CX6g042564 | 6:5,695,062-5,696,615 | - | C1H6g22566 | C2H6g07579 | LOC_Os06g12510 | Os06g0231100 | - | Detail |
| CX6g042953 | 6:5,698,756-5,700,911 | + | C1H6g10940 | C2H6g25430 | LOC_Os06g12530 | Os06g0231300 | ROX3 | Detail |
| CX6g044108 | 6:5,701,242-5,703,059 | - | C1H6g22566 | C2H6g00549 | LOC_Os06g12510 | Os06g0231400 | - | Detail |
| CX6g042127 | 6:5,709,577-5,711,717 | - | C1H6g09372 | C2H6g20507 | LOC_Os06g12560 | Os06g0231600 | - | Detail |
| CX6g045497 | 6:5,715,768-5,718,733 | - | C1H6g21654 | C2H6g04942 | LOC_Os06g12580 | Os06g0232000 | - | Detail |
| CX6g042920 | 6:5,721,736-5,722,246 | + | C1H6g04188 | - | - | - | - | Detail |