| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g26067 | 6:26,475,711-26,480,166 | - | C2H6g26642 | CX6g042212 | LOC_Os06g50340 | Os06g0717200 | FON1 | Detail |
| C1H6g24203 | 6:26,486,546-26,487,767 | + | C2H6g03771 | CX6g044193 | LOC_Os06g50350 | Os06g0717300 | - | Detail |
| C1H6g26535 | 6:26,488,606-26,492,976 | - | C2H6g11097 | CX6g043233 | LOC_Os06g50360 | Os06g0717400 | - | Detail |
| C1H6g11168 | 6:26,500,922-26,504,163 | + | C2H6g06329 | CX6g044654 | LOC_Os06g50370 | Os06g0717600 | - | Detail |
| C1H6g02180 | 6:26,504,718-26,509,063 | - | C2H6g29972 | CX6g042111 | LOC_Os06g50380 | Os06g0717800 | - | Detail |
| C1H6g12787 | 6:26,517,609-26,520,204 | + | C2H6g12324 | CX6g041593 | LOC_Os06g50390 | Os06g0717900 | - | Detail |
| C1H6g01307 | 6:26,519,958-26,520,161 | - | - | - | - | - | - | Detail |
| C1H6g28933 | 6:26,528,690-26,529,557 | + | C2H6g23852 | CX6g045196 | LOC_Os06g50400 | Os06g0718100 | - | Detail |
| C1H6g11029 | 6:26,530,430-26,532,641 | - | C2H6g14031 | CX6g045106 | LOC_Os06g50410 | Os06g0718300 | - | Detail |
| C1H6g25040 | 6:26,536,953-26,537,579 | + | C2H6g24021 | CX6g041719 | LOC_Os06g50420 | Os06g0718400 | - | Detail |
| C1H6g27071 | 6:26,542,159-26,544,289 | + | C2H6g25837 | CX6g043688 | LOC_Os06g50580 | Os06g0719600 | - | Detail |
| C1H6g03080 | 6:26,548,562-26,551,445 | - | C2H6g09082 | CX6g041955 | LOC_Os06g50600 | Os06g0719500 | - | Detail |
| C1H6g00051 | 6:26,555,703-26,563,845 | + | C2H6g19919 | CX6g045246 | LOC_Os06g50850 | Os06g0724200 | - | Detail |
| C1H6g19086 | 6:26,564,128-26,567,302 | - | C2H6g24940 | CX6g044030 | LOC_Os06g50860 | Os06g0724300 | - | Detail |
| C1H6g18113 | 6:26,567,913-26,570,136 | - | C2H6g07069 | CX6g041511 | LOC_Os06g50870 | Os06g0724400 | - | Detail |
| C1H6g27289 | 6:26,570,558-26,573,097 | - | C2H6g29259 | CX6g041595 | LOC_Os06g50880 | Os06g0724500 | - | Detail |
| C1H6g23028 | 6:26,573,237-26,577,225 | + | C2H6g08226 | CX6g043078 | LOC_Os06g50890 | Os06g0724600 | - | Detail |
| C1H6g19535 | 6:26,594,428-26,595,716 | + | C2H6g28694 | CX6g044716 | LOC_Os06g50900 | Os06g0724800 | - | Detail |
| C1H6g31802 | 6:26,598,126-26,610,819 | - | C2H6g09528 | CX6g045960 | LOC_Os06g50910 | Os06g0724700 | - | Detail |
| C1H6g29296 | 6:26,611,960-26,617,519 | + | C2H6g06943 | CX6g044048 | LOC_Os06g50920 | Os06g0724900 | ILA1, ILA1, ila1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044633 | 6:5,620,920-5,623,937 | - | C1H6g00685 | C2H6g25379 | LOC_Os06g12330 | Os06g0228600 | - | Detail |
| CX6g044499 | 6:5,627,654-5,630,966 | - | C1H6g13390 | C2H6g08385 | LOC_Os06g12350 | Os06g0228800 | - | Detail |
| CX6g044711 | 6:5,632,613-5,634,556 | + | C1H6g22566 | C2H6g19334 | LOC_Os06g12360 | Os06g0228900 | - | Detail |
| CX6g044911 | 6:5,635,672-5,636,730 | + | C1H6g15439 | C2H6g28900 | LOC_Os06g12360 | Os06g0228950 | - | Detail |
| CX6g043477 | 6:5,637,445-5,640,204 | - | C1H6g14481 | C2H6g05024 | LOC_Os06g12370 | Os06g0229000 | - | Detail |
| CX6g043791 | 6:5,651,304-5,654,639 | + | C1H6g30867 | C2H6g02329 | LOC_Os06g12390 | Os06g0229200 | GalT | Detail |
| CX6g041469 | 6:5,660,937-5,665,483 | + | C1H6g06761 | C2H6g13941 | LOC_Os06g12400 | Os06g0229300 | - | Detail |
| CX6g045028 | 6:5,667,402-5,669,008 | + | C1H6g31791 | C2H6g19443 | LOC_Os06g12410 | Os06g0257600 | - | Detail |
| CX6g044435 | 6:5,670,609-5,675,017 | + | C1H6g30269 | C2H6g15100 | LOC_Os06g12450 | Os06g0229800 | ALK, alk, SSII-3, OsSSIIa, OsSSII-3, SSIIa, SSS2A, OsSSIIaChr6 | Detail |
| CX6g044319 | 6:5,676,877-5,677,302 | - | - | - | LOC_Os06g12455 | Os06g0230000 | - | Detail |
| CX6g043509 | 6:5,679,818-5,679,973 | - | - | - | - | Os07g0616100 | - | Detail |
| CX6g041722 | 6:5,680,287-5,685,129 | + | C1H6g02539 | C2H6g02967 | LOC_Os06g12460 | Os06g0230100 | OsCSLA3 | Detail |
| CX6g044662 | 6:5,688,658-5,688,996 | - | - | - | - | - | - | Detail |
| CX6g043899 | 6:5,693,580-5,694,389 | + | C1H6g20958 | C2H6g18393 | LOC_Os06g12500 | Os06g0231050 | CASP3, OsCASP3 | Detail |
| CX6g042564 | 6:5,695,062-5,696,615 | - | C1H6g22566 | C2H6g07579 | LOC_Os06g12510 | Os06g0231100 | - | Detail |
| CX6g042953 | 6:5,698,756-5,700,911 | + | C1H6g10940 | C2H6g25430 | LOC_Os06g12530 | Os06g0231300 | ROX3 | Detail |
| CX6g044108 | 6:5,701,242-5,703,059 | - | C1H6g22566 | C2H6g00549 | LOC_Os06g12510 | Os06g0231400 | - | Detail |
| CX6g042127 | 6:5,709,577-5,711,717 | - | C1H6g09372 | C2H6g20507 | LOC_Os06g12560 | Os06g0231600 | - | Detail |
| CX6g045497 | 6:5,715,768-5,718,733 | - | C1H6g21654 | C2H6g04942 | LOC_Os06g12580 | Os06g0232000 | - | Detail |
| CX6g042920 | 6:5,721,736-5,722,246 | + | C1H6g04188 | - | - | - | - | Detail |