| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g03465 | 1:33,925,968-33,932,096 | + | C2H1g05908 | CX1g004350 | LOC_Os01g65986 | Os01g0882400 | - | Detail |
| C1H1g00623 | 1:33,932,318-33,933,271 | - | C2H1g09811 | CX1g004839 | LOC_Os01g66000 | Os01g0882500 | - | Detail |
| C1H1g12565 | 1:33,935,301-33,938,373 | - | C2H1g26075 | CX1g001863 | LOC_Os01g66010 | Os01g0882800 | OsAAP8 | Detail |
| C1H1g06649 | 1:33,942,178-33,944,112 | + | C2H1g21282 | CX1g003084 | LOC_Os01g66020 | Os01g0883000 | - | Detail |
| C1H1g27902 | 1:33,944,778-33,946,860 | - | C2H1g11503 | CX1g000214 | LOC_Os01g66030 | Os01g0883100 | OsMADS2 | Detail |
| C1H1g29165 | 1:33,949,084-33,955,843 | + | C2H1g08965 | CX1g004776 | LOC_Os01g66050 | Os01g0883200 | - | Detail |
| C1H1g17858 | 1:33,967,397-33,967,924 | + | C2H1g04719 | CX1g000593 | LOC_Os01g66070 | Os01g0883400 | - | Detail |
| C1H1g04579 | 1:33,989,125-33,992,241 | + | C2H1g18953 | CX1g004921 | LOC_Os01g66100 | Os01g0883800 | 20ox2, C20OX2, GA20, GA20ox-2, Os20ox2, OsGA20ox-2, OsGA20ox2, SD1, SD1-in, SD1-ja, Sd-1, d47, d49, sd-1, sd1, "sd1 (d47, sd1-d, sd1-1)", sd1-1, sd1-2, sd1-3, sd1-4 | Detail |
| C1H1g11499 | 1:33,993,131-33,998,717 | - | C2H1g12762 | CX1g004480 | LOC_Os01g66110 | Os01g0883900 | - | Detail |
| C1H1g00819 | 1:34,007,330-34,009,110 | - | C2H1g26289 | CX1g006945 | LOC_Os01g66120 | Os01g0884300 | OsNAC6 | Detail |
| C1H1g22008 | 1:34,011,640-34,021,664 | + | C2H1g15992 | CX1g000207 | LOC_Os01g66130 | Os01g0884400 | OsPUB16, OsPIE3 | Detail |
| C1H1g14405 | 1:34,021,792-34,033,195 | - | C2H1g16552 | CX1g001201 | LOC_Os01g66140 | Os01g0884500 | - | Detail |
| C1H1g17014 | 1:34,036,736-34,037,656 | - | C2H1g27234 | CX1g001119 | - | - | - | Detail |
| C1H1g08290 | 1:34,042,347-34,044,193 | - | C2H1g20664 | CX1g001844 | LOC_Os01g66150 | Os01g0884700 | - | Detail |
| C1H1g07105 | 1:34,046,254-34,047,810 | + | C2H1g19237 | CX1g005283 | LOC_Os01g66160 | Os01g0884800 | - | Detail |
| C1H1g15937 | 1:34,048,050-34,051,340 | - | C2H1g27259 | CX1g006373 | LOC_Os01g66170 | Os01g0884900 | - | Detail |
| C1H1g27873 | 1:34,052,322-34,054,243 | + | C2H1g17695 | CX1g005687 | LOC_Os01g66180 | Os01g0885000 | - | Detail |
| C1H1g01709 | 1:34,056,791-34,057,984 | - | - | CX1g002386 | LOC_Os01g66190 | Os01g0885200 | - | Detail |
| C1H1g19782 | 1:34,061,702-34,067,363 | - | C2H1g03917 | CX1g002733 | LOC_Os01g66200 | Os01g0885300 | - | Detail |
| C1H1g04510 | 1:34,077,032-34,077,985 | - | C2H1g15479 | CX1g006568 | LOC_Os01g66230 | Os01g0885500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042881 | 6:5,458,034-5,459,025 | + | C1H6g01938 | C2H6g24309 | LOC_Os06g12180 | Os06g0226050 | - | Detail |
| CX6g041260 | 6:5,463,157-5,463,318 | + | - | - | - | - | - | Detail |
| CX6g043965 | 6:5,466,424-5,466,576 | + | - | - | - | - | - | Detail |
| CX6g045737 | 6:5,468,915-5,470,072 | + | - | C2H6g02811 | LOC_Os06g12190 | Os06g0226100 | - | Detail |
| CX6g043438 | 6:5,469,214-5,469,633 | - | - | - | - | Os06g0226083 | - | Detail |
| CX6g044185 | 6:5,473,326-5,473,993 | - | C1H6g28678 | - | - | - | - | Detail |
| CX6g044168 | 6:5,489,098-5,489,620 | + | C1H6g22615 | C2H6g23807 | LOC_Os06g12210 | Os06g0226500 | BU1, ILI4, OsBU1 | Detail |
| CX6g042628 | 6:5,492,575-5,495,783 | - | C1H6g21719 | C2H6g18191 | LOC_Os06g12220 | Os06g0226600 | - | Detail |
| CX6g041579 | 6:5,504,938-5,506,137 | + | C1H6g16379 | C2H6g17229 | LOC_Os06g12230 | Os06g0226700 | OsTCP19 | Detail |
| CX6g044276 | 6:5,523,043-5,524,445 | - | C1H6g07627 | C2H6g02328 | LOC_Os06g12250 | Os06g0226950 | DSH1 | Detail |
| CX6g045020 | 6:5,529,989-5,535,797 | - | C1H6g11292 | C2H6g14727 | LOC_Os06g12260 | Os06g0227200 | - | Detail |
| CX6g042480 | 6:5,538,624-5,541,223 | - | C1H6g26075 | C2H6g23716 | LOC_Os06g12280 | Os06g0227250 | - | Detail |
| CX6g041591 | 6:5,543,080-5,543,292 | + | - | - | - | - | - | Detail |
| CX6g045728 | 6:5,548,933-5,549,685 | + | - | C2H6g12028 | LOC_Os06g12290 | Os06g0227500 | - | Detail |
| CX6g042604 | 6:5,560,543-5,560,716 | - | - | - | - | Os02g0188201 | - | Detail |
| CX6g045006 | 6:5,561,707-5,562,009 | - | - | - | - | Os07g0631500 | - | Detail |
| CX6g043695 | 6:5,562,119-5,563,174 | + | - | - | - | - | - | Detail |
| CX6g044689 | 6:5,586,293-5,590,571 | - | C1H6g30505 | C2H6g19929 | LOC_Os06g12310 | Os06g0228200 | - | Detail |
| CX6g042381 | 6:5,613,979-5,614,131 | + | - | - | - | - | - | Detail |
| CX6g043945 | 6:5,616,557-5,618,950 | + | C1H6g14066 | C2H6g06545 | LOC_Os06g12320 | Os06g0228500 | - | Detail |