| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g21251 | 11:22,119,974-22,120,429 | - | - | - | - | - | - | Detail |
| C2H11g01232 | 11:22,124,937-22,126,647 | + | C1H11g21328 | CX11g013922 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| C2H11g18143 | 11:22,128,471-22,129,993 | - | C1H11g28520 | CX11g014541 | LOC_Os11g41870 | Os11g0637400 | OsPLT13 | Detail |
| C2H11g25023 | 11:22,132,085-22,133,700 | - | C1H11g11924 | CX11g012059 | LOC_Os11g41875 | Os11g0637501 | - | Detail |
| C2H11g06094 | 11:22,134,636-22,136,606 | - | C1H11g11834 | CX11g014677 | LOC_Os11g41880 | Os11g0637600 | - | Detail |
| C2H11g23632 | 11:22,146,539-22,151,026 | + | C1H11g18437 | CX11g013418 | LOC_Os11g41890 | Os11g0637700 | - | Detail |
| C2H11g11167 | 11:22,153,507-22,159,821 | - | C1H11g02220 | CX11g012671 | LOC_Os11g41900 | Os11g0637800 | OsLPAT2 | Detail |
| C2H11g12421 | 11:22,159,583-22,159,843 | + | - | CX11g013667 | - | Os11g0637900 | - | Detail |
| C2H11g19429 | 11:22,164,865-22,171,149 | + | C1H11g07864 | CX11g015032 | LOC_Os11g41910 | Os11g0638000 | - | Detail |
| C2H11g03357 | 11:22,173,214-22,175,626 | + | C1H11g09334 | CX11g010889 | LOC_Os11g41920 | Os11g0638200 | - | Detail |
| C2H11g20923 | 11:22,176,811-22,177,227 | + | C1H11g09676 | - | LOC_Os11g41920 | Os11g0638200 | - | Detail |
| C2H11g11753 | 11:22,178,524-22,178,943 | + | C1H11g09676 | - | LOC_Os11g41940 | Os11g0638200 | - | Detail |
| C2H11g21824 | 11:22,191,703-22,198,340 | - | C1H11g30292 | CX11g012224 | LOC_Os11g42030 | Os11g0638700 | - | Detail |
| C2H11g29546 | 11:22,200,138-22,206,985 | - | C1H11g06054 | CX11g012224 | LOC_Os11g41990 | Os11g0638900 | - | Detail |
| C2H11g03512 | 11:22,213,918-22,218,294 | + | C1H11g14461 | CX11g011607 | LOC_Os11g42000 | Os11g0639000 | - | Detail |
| C2H11g16299 | 11:22,219,274-22,222,420 | - | C1H11g01927 | CX11g014851 | LOC_Os11g42010 | Os11g0639100 | Pi54, Pi-kh, Pi-k<sup>h</sup> | Detail |
| C2H11g25522 | 11:22,222,942-22,229,831 | + | - | CX11g013493 | LOC_Os11g31220 | Os11g0534500 | - | Detail |
| C2H11g11704 | 11:22,236,842-22,242,408 | + | C1H11g18860 | CX11g012967 | - | - | - | Detail |
| C2H11g04023 | 11:22,254,808-22,258,893 | + | C1H11g03199 | CX11g013576 | LOC_Os11g42100 | Os11g0640800 | - | Detail |
| C2H11g22122 | 11:22,273,993-22,279,465 | + | C1H11g31489 | CX11g014890 | LOC_Os11g42160 | Os11g0641200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043430 | 6:5,234,825-5,235,898 | - | C1H6g05796 | C2H6g29836 | LOC_Os06g11860 | Os06g0222400 | OsERF120 | Detail |
| CX6g042828 | 6:5,260,534-5,261,106 | - | - | C2H6g28302 | - | - | - | Detail |
| CX6g042254 | 6:5,274,475-5,274,714 | - | - | C2H6g28327 | - | - | - | Detail |
| CX6g043510 | 6:5,274,889-5,275,346 | + | C1H6g29059 | C2H6g19517 | LOC_Os06g13700 | - | - | Detail |
| CX6g043930 | 6:5,285,653-5,287,662 | + | C1H6g27313 | C2H6g21982 | LOC_Os06g16640 | Os06g0278000 | - | Detail |
| CX6g044400 | 6:5,292,339-5,294,535 | - | C1H6g29282 | C2H6g15738 | LOC_Os06g11910 | Os06g0222800 | - | Detail |
| CX6g043189 | 6:5,295,944-5,298,964 | - | C1H6g02178 | C2H6g10459 | LOC_Os06g11920 | Os06g0222900 | - | Detail |
| CX6g041485 | 6:5,310,485-5,311,330 | + | - | - | LOC_Os06g11930 | - | - | Detail |
| CX6g043681 | 6:5,314,212-5,317,608 | - | C1H6g19373 | C2H6g18727 | LOC_Os06g11960 | Os06g0223200 | - | Detail |
| CX6g043809 | 6:5,317,831-5,321,496 | + | C1H6g01570 | C2H6g28885 | LOC_Os06g11970 | Os06g0223300 | MADS63, OsMADS63 | Detail |
| CX6g043571 | 6:5,339,010-5,340,471 | - | C1H6g15343 | C2H6g01453 | LOC_Os06g11980 | Os06g0223700 | OsFLZ20 | Detail |
| CX6g041262 | 6:5,346,381-5,356,379 | - | C1H6g09653 | C2H6g13530 | LOC_Os06g11990 | Os06g0223800 | - | Detail |
| CX6g043703 | 6:5,364,287-5,365,069 | - | C1H2g05316 | C2H6g07273 | LOC_Os06g12000 | Os06g0224000 | - | Detail |
| CX6g043936 | 6:5,372,680-5,374,242 | + | C1H6g19428 | C2H6g06279 | LOC_Os06g12020 | Os06g0224100 | - | Detail |
| CX6g043259 | 6:5,377,722-5,382,783 | - | C1H6g10448 | C2H6g26147 | LOC_Os06g12030 | Os06g0224200 | - | Detail |
| CX6g043332 | 6:5,423,883-5,425,064 | + | C1H6g11956 | C2H6g23713 | LOC_Os06g12110 | Os06g0225200 | - | Detail |
| CX6g044317 | 6:5,425,866-5,429,579 | - | C1H6g15801 | C2H6g30169 | LOC_Os06g12120 | Os06g0225300 | - | Detail |
| CX6g041229 | 6:5,431,695-5,433,139 | - | C1H6g29562 | C2H6g20981 | LOC_Os06g12129 | Os06g0225400 | - | Detail |
| CX6g044703 | 6:5,434,448-5,437,054 | - | C1H6g09700 | C2H6g07269 | LOC_Os06g12150 | Os06g0225800 | OsSK2 | Detail |
| CX6g045236 | 6:5,443,920-5,454,277 | - | C1H6g00784 | C2H6g06974 | LOC_Os06g12160 | Os06g0225900 | - | Detail |