| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06044 | 5:8,732,534-8,738,092 | - | C2H5g03374 | CX5g040958 | LOC_Os05g19630 | Os05g0277300 | - | Detail |
| C1H5g02530 | 5:8,760,037-8,760,783 | + | C2H5g20956 | CX5g038137 | LOC_Os05g19670 | Os05g0277500 | - | Detail |
| C1H5g11498 | 5:8,792,083-8,797,263 | - | C2H5g25018 | CX5g037933 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| C1H5g29704 | 5:8,828,494-8,835,493 | - | C2H5g28009 | CX5g039281 | LOC_Os05g19954 | Os05g0279300 | - | Detail |
| C1H5g23736 | 5:8,893,494-8,899,217 | + | C2H5g12080 | CX5g037702 | LOC_Os05g19970 | Os05g0279400 | - | Detail |
| C1H5g23078 | 5:8,917,761-8,927,257 | + | C2H5g08718 | CX5g039549 | LOC_Os05g19974 | Os05g0279600 | - | Detail |
| C1H5g13096 | 5:8,934,229-8,937,379 | + | C2H5g23273 | CX5g039172 | LOC_Os05g20020 | Os05g0279900 | - | Detail |
| C1H5g28156 | 5:8,974,209-8,975,740 | + | C2H5g23868 | CX5g039890 | - | Os05g0480700 | - | Detail |
| C1H5g25005 | 5:8,980,073-8,981,614 | - | C2H5g01527 | CX5g040064 | LOC_Os05g20050 | Os05g0280200 | - | Detail |
| C1H5g26284 | 5:9,051,646-9,054,481 | - | C2H5g28478 | CX5g038222 | LOC_Os05g20100 | Os05g0280500 | - | Detail |
| C1H5g03157 | 5:9,120,269-9,120,637 | - | C2H5g02247 | CX5g038694 | LOC_Os05g20420 | - | - | Detail |
| C1H5g29214 | 5:9,133,203-9,134,894 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g05125 | 5:9,134,991-9,135,359 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g08577 | 5:9,139,631-9,141,530 | - | C2H5g23953 | - | - | - | - | Detail |
| C1H5g05724 | 5:9,683,767-9,688,347 | + | C2H5g14404 | CX5g036941 | LOC_Os05g21180 | Os05g0287800 | OsIPCS3 | Detail |
| C1H5g04296 | 5:9,919,264-9,919,647 | + | C2H5g08960 | CX5g039313 | - | Os05g0289100 | - | Detail |
| C1H5g30033 | 5:9,921,175-9,923,640 | + | C2H3g30122 | CX6g041640 | - | Os04g0412350 | - | Detail |
| C1H5g26586 | 5:9,950,371-9,955,328 | - | C2H5g21346 | CX5g040894 | LOC_Os05g22260 | Os05g0289400 | - | Detail |
| C1H5g29959 | 5:9,956,464-9,956,942 | - | C2H5g29326 | CX5g040964 | LOC_Os05g22270 | - | - | Detail |
| C1H5g08048 | 5:9,965,097-9,966,597 | + | C2H5g03823 | CX5g040911 | LOC_Os05g22300 | Os05g0289700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043430 | 6:5,234,825-5,235,898 | - | C1H6g05796 | C2H6g29836 | LOC_Os06g11860 | Os06g0222400 | OsERF120 | Detail |
| CX6g042828 | 6:5,260,534-5,261,106 | - | - | C2H6g28302 | - | - | - | Detail |
| CX6g042254 | 6:5,274,475-5,274,714 | - | - | C2H6g28327 | - | - | - | Detail |
| CX6g043510 | 6:5,274,889-5,275,346 | + | C1H6g29059 | C2H6g19517 | LOC_Os06g13700 | - | - | Detail |
| CX6g043930 | 6:5,285,653-5,287,662 | + | C1H6g27313 | C2H6g21982 | LOC_Os06g16640 | Os06g0278000 | - | Detail |
| CX6g044400 | 6:5,292,339-5,294,535 | - | C1H6g29282 | C2H6g15738 | LOC_Os06g11910 | Os06g0222800 | - | Detail |
| CX6g043189 | 6:5,295,944-5,298,964 | - | C1H6g02178 | C2H6g10459 | LOC_Os06g11920 | Os06g0222900 | - | Detail |
| CX6g041485 | 6:5,310,485-5,311,330 | + | - | - | LOC_Os06g11930 | - | - | Detail |
| CX6g043681 | 6:5,314,212-5,317,608 | - | C1H6g19373 | C2H6g18727 | LOC_Os06g11960 | Os06g0223200 | - | Detail |
| CX6g043809 | 6:5,317,831-5,321,496 | + | C1H6g01570 | C2H6g28885 | LOC_Os06g11970 | Os06g0223300 | MADS63, OsMADS63 | Detail |
| CX6g043571 | 6:5,339,010-5,340,471 | - | C1H6g15343 | C2H6g01453 | LOC_Os06g11980 | Os06g0223700 | OsFLZ20 | Detail |
| CX6g041262 | 6:5,346,381-5,356,379 | - | C1H6g09653 | C2H6g13530 | LOC_Os06g11990 | Os06g0223800 | - | Detail |
| CX6g043703 | 6:5,364,287-5,365,069 | - | C1H2g05316 | C2H6g07273 | LOC_Os06g12000 | Os06g0224000 | - | Detail |
| CX6g043936 | 6:5,372,680-5,374,242 | + | C1H6g19428 | C2H6g06279 | LOC_Os06g12020 | Os06g0224100 | - | Detail |
| CX6g043259 | 6:5,377,722-5,382,783 | - | C1H6g10448 | C2H6g26147 | LOC_Os06g12030 | Os06g0224200 | - | Detail |
| CX6g043332 | 6:5,423,883-5,425,064 | + | C1H6g11956 | C2H6g23713 | LOC_Os06g12110 | Os06g0225200 | - | Detail |
| CX6g044317 | 6:5,425,866-5,429,579 | - | C1H6g15801 | C2H6g30169 | LOC_Os06g12120 | Os06g0225300 | - | Detail |
| CX6g041229 | 6:5,431,695-5,433,139 | - | C1H6g29562 | C2H6g20981 | LOC_Os06g12129 | Os06g0225400 | - | Detail |
| CX6g044703 | 6:5,434,448-5,437,054 | - | C1H6g09700 | C2H6g07269 | LOC_Os06g12150 | Os06g0225800 | OsSK2 | Detail |
| CX6g045236 | 6:5,443,920-5,454,277 | - | C1H6g00784 | C2H6g06974 | LOC_Os06g12160 | Os06g0225900 | - | Detail |